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Multi-scale comparative transcriptome analysis reveals key genes and metabolic reprogramming processes associated with oil palm fruit abscission.

Kim FooyontphanichFabienne MorcilloThierry JoëtStéphane DussertJulien SerretMyriam CollinPhilippe AmblardSithichoke TangphatsornruangPeerapat RoongsatthamChatchawan JantasuriyaratJean-Luc VerdeilTimothy John Tranbarger
Published in: BMC plant biology (2021)
The study provides the first reference transcriptome of a monocot fleshy fruit abscission zone and provides insight into the mechanisms underlying abscission by identifying key genes with functional roles and processes, including metabolic transitions, cell wall modifications, signalling, stress adaptations and transcriptional regulation, that occur during ripe fruit abscission of the monocot oil palm. The transcriptome data comprises an original reference and resource useful towards understanding the evolutionary basis of this fundamental plant process.
Keyphrases
  • genome wide
  • cell wall
  • dna methylation
  • rna seq
  • single cell
  • gene expression
  • fatty acid
  • electronic health record
  • high intensity
  • stress induced