SearcHPV: A novel approach to identify and assemble human papillomavirus-host genomic integration events in cancer.
Lisa M PinattiWenjin GuYifan WangAhmed ElhossinyApurva D BhangaleCollin V BrummelThomas E CareyRyan E MillsJohn Chad BrennerPublished in: Cancer (2021)
In summary, SearcHPV is a new optimized tool for the accurate detection of HPV-human integration sites from targeted capture DNA sequencing data.
Keyphrases
- endothelial cells
- papillary thyroid
- circulating tumor
- electronic health record
- induced pluripotent stem cells
- squamous cell
- high grade
- single cell
- cancer therapy
- single molecule
- cell free
- high resolution
- big data
- loop mediated isothermal amplification
- copy number
- pluripotent stem cells
- label free
- real time pcr
- lymph node metastasis
- machine learning
- gene expression
- childhood cancer
- young adults
- dna methylation
- drug delivery
- data analysis
- genome wide