Abiotic stresses such as drought and salinity are major environmental factors limiting plant productivity. Autophagy-related genes are extensively involved in plant growth, development, and adverse stress responses, which have not yet been characterized in Tartary buckwheat ( Fagopyrum tataricum , TB). In this study, we verified that drought stress could induce autophagy in TB roots. Next, 49 FtATGs in the whole genome of TB were identified. All FtATGs were randomly distributed in 8 known chromosomes, while 11 FtATGs were predictably segmental repeats. As the core component of autophagy, there were 8 FtATG8s with similar gene structures in TB, while FtATG8s showed high expression at the transcription level under drought and salt stresses. The cis -acting element analysis identified that all FtATG8 promoters contain light-responsive and MYB-binding elements. FtATG8s showed a cell-wide protein interaction network and strongly correlated with distinct stress-associated transcription factors. Furthermore, overexpression of FtATG8a and FtATG8f enhanced the antioxidant enzyme activities of TB under adverse stresses. Remarkably, FtATG8a and FtATG8f may be vital candidates functioning in stress resistance in TB. This study prominently aids in understanding the biological role of FtATG genes in TB.
Keyphrases
- genome wide identification
- transcription factor
- mycobacterium tuberculosis
- plant growth
- cell death
- oxidative stress
- poor prognosis
- signaling pathway
- climate change
- endoplasmic reticulum stress
- genome wide
- binding protein
- dna binding
- stem cells
- heat stress
- multidrug resistant
- mass spectrometry
- copy number
- mesenchymal stem cells
- gene expression
- microbial community
- adverse drug
- antiretroviral therapy
- amino acid
- network analysis