Increasing evidence suggests that osteoblast apoptosis contributes to the pathogenesis of postmenopausal osteoporosis (PMOP). This study aimed to identify a hub gene associated with osteoporosis (OP) progression and its functions. We utilized the GSE68303 expression dataset from GEO database and conducted weighted gene co-expression network analysis (WGCNA) to investigate changes in co-expressed genes between sham and ovariectomy (OVX) groups. Differentially expressed genes (DEGs) were identified using the "limma" R package on GSE68303 dataset. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed using the DAVID database. A protein-protein interaction (PPI) network was constructed using the STRING database, which was visualized by Cytoscape software. The top ten hub genes were screened using the Cytohubba plugin, among which POU class 2 homeobox associating factor 1 (POU2AF1), an OP-related hub gene, showed a significant increase in OVX-induced mouse model based on immunohistochemical staining. Inhibition of POU2AF1 suppressed cell viability, induced cell cycle arrest at the G1 phase, and promoted osteoblast apoptosis as demonstrated by CCK-8 assay, flow cytometry analysis, and TUNEL assay. Moreover, overexpression of POU2AF1 decreased cleaved caspase-3/-8/-9 expression while increasing cyclinD1 and Ki67 expression in MC3T3-E1 and hFOB1.19 cells. Therefore, POU2AF1 may serve as a potential diagnostic biomarker for slowing down the progression of OP.
Keyphrases
- cell cycle arrest
- network analysis
- genome wide identification
- genome wide
- cell death
- bioinformatics analysis
- poor prognosis
- pi k akt
- copy number
- genome wide analysis
- transcription factor
- protein protein
- atrial fibrillation
- flow cytometry
- dna methylation
- oxidative stress
- mouse model
- postmenopausal women
- small molecule
- drug induced
- binding protein
- magnetic resonance
- high throughput
- cell proliferation
- emergency department
- gene expression
- high glucose
- clinical trial
- long non coding rna
- stress induced
- wastewater treatment
- climate change
- neoadjuvant chemotherapy
- adverse drug
- endothelial cells