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Precision oncology using a limited number of cells: optimization of whole genome amplification products for sequencing applications.

Shonan ShoColin M CourtPaul WinogradSangjun LeeShuang HouThomas G GraeberHsian-Rong TsengJames S Tomlinson
Published in: BMC cancer (2017)
The modified-WGA protocol coupled with the 8-gene QC serve as an effective strategy to enhance the quality of low-template WGA reactions. Furthermore, a threshold number of 5-10 cells are likely needed for a reliable WGA reaction and product with high fidelity to the original starting template.
Keyphrases
  • induced apoptosis
  • cell cycle arrest
  • randomized controlled trial
  • palliative care
  • endoplasmic reticulum stress
  • cell death
  • copy number
  • genome wide
  • mass spectrometry