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Design and Discovery of N-(3-(2-(2-Hydroxyethoxy)-6-morpholinopyridin-4-yl)-4-methylphenyl)-2-(trifluoromethyl)isonicotinamide, a Selective, Efficacious, and Well-Tolerated RAF Inhibitor Targeting RAS Mutant Cancers: The Path to the Clinic.

Savithri RamurthyBenjamin R TaftRobert J AversaPaul A BarsantiMatthew T BurgerYan LouGisele A NishiguchiAlice RicoLina SettiAaron SmithSharadha SubramanianVictoriano TamezHuw TannerLifeng WanCheng HuBrent A AppletonMulugeta MamoLaura TandeskeJohn E TellewShenlin HuangQin YueApurva ChaudharyHung TianRaman IyerA Quamrul HassanLesley A Mathews GrinerLaura R La BonteVesselina G CookeAnne Van AbbemaHanne MerrittKalyani GampaFei FengJing YuanYuji MishinaYingyun WangJacob R HalingSepideh VaziriMohammad Hekmat-NejadValery PolyakovRichard ZangVijay SethuramanPayman AmiriMallika SinghWilliam R SellersEmma LeesWenlin ShaoMichael P DillonDarrin D Stuart
Published in: Journal of medicinal chemistry (2019)
Direct pharmacological inhibition of RAS has remained elusive, and efforts to target CRAF have been challenging due to the complex nature of RAF signaling, downstream of activated RAS, and the poor overall kinase selectivity of putative RAF inhibitors. Herein, we describe 15 (LXH254, Aversa, R.; et al. Int. Patent WO2014151616A1, 2014), a selective B/C RAF inhibitor, which was developed by focusing on drug-like properties and selectivity. Our previous tool compound, 3 (RAF709; Nishiguchi, G. A.; et al. J. Med. Chem. 2017, 60, 4969), was potent, selective, efficacious, and well tolerated in preclinical models, but the high human intrinsic clearance precluded further development and prompted further investigation of close analogues. A structure-based approach led to a pyridine series with an alcohol side chain that could interact with the DFG loop and significantly improved cell potency. Further mitigation of human intrinsic clearance and time-dependent inhibition led to the discovery of 15. Due to its excellent properties, it was progressed through toxicology studies and is being tested in phase 1 clinical trials.
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