EWSR1-WT1 Target Genes and Therapeutic Options Identified in a Novel DSRCT In Vitro Model.
Margit BleijsCorine PleijteSem EngelsFemke RingnaldaFriederike Meyer-WentrupMarc van de WeteringHans CleversPublished in: Cancers (2021)
Desmoplastic small round cell tumor (DSRCT) is a rare and aggressive soft tissue sarcoma with a lack of effective treatment options and a poor prognosis. DSRCT is characterized by a chromosomal translocation, resulting in the EWSR1-WT1 gene fusion. The molecular mechanisms driving DSRCT are poorly understood, and a paucity of preclinical models hampers DSRCT research. Here, we establish a novel primary patient-derived DSRCT in vitro model, recapitulating the original tumor. We find that EWSR1-WT1 expression affects cell shape and cell survival, and we identify downstream target genes of the EWSR1-WT1 fusion. Additionally, this preclinical in vitro model allows for medium-throughput drug screening. We discover sensitivity to several drugs, including compounds targeting RTKs. MERTK, which has been described as a therapeutic target for several malignancies, correlates with EWSR1-WT1 expression. Inhibition of MERTK with the small-molecule inhibitor UNC2025 results in reduced proliferation of DSRCT cells in vitro, suggesting MERTK as a therapeutic target in DSRCT. This study underscores the usefulness of preclinical in vitro models for studying molecular mechanisms and potential therapeutic options.
Keyphrases
- poor prognosis
- cell therapy
- long non coding rna
- small molecule
- genome wide
- single cell
- genome wide identification
- copy number
- stem cells
- signaling pathway
- cell cycle arrest
- genome wide analysis
- binding protein
- dna methylation
- cell death
- transcription factor
- gene expression
- adverse drug
- protein protein
- endoplasmic reticulum stress
- oxidative stress