Inherited Retinal Degeneration Caused by Dehydrodolichyl Diphosphate Synthase Mutation-Effect of an ALG6 Modifier Variant.
Elisha MonsonArtur V CideciyanAlejandro J RomanAlexander SumarokaMalgorzata SwiderVivian WuIryna ViarbitskayaSamuel G JacobsonSteven J FlieslerSteven J PittlerPublished in: International journal of molecular sciences (2024)
Modern advances in disease genetics have uncovered numerous modifier genes that play a role in the severity of disease expression. One such class of genetic conditions is known as inherited retinal degenerations (IRDs), a collection of retinal degenerative disorders caused by mutations in over 300 genes. A single missense mutation (K42E) in the gene encoding the enzyme dehydrodolichyl diphosphate synthase (DHDDS), which is required for protein N-glycosylation in all cells and tissues, causes DHDDS -IRD (retinitis pigmentosa type 59 (RP59; OMIM #613861)). Apart from a retinal phenotype, however, DHDDS -IRD is surprisingly non-syndromic (i.e., without any systemic manifestations). To explore disease pathology, we selected five glycosylation-related genes for analysis that are suggested to have disease modifier variants. These genes encode glycosyltransferases ( ALG6 , ALG8 ), an ER resident protein ( DDOST ), a high-mannose oligosaccharyl transferase ( MPDU1 ), and a protein N-glycosylation regulatory protein ( TNKS ). DNA samples from 11 confirmed DHDDS (K42E)-IRD patients were sequenced at the site of each candidate genetic modifier. Quantitative measures of retinal structure and function were performed across five decades of life by evaluating foveal photoreceptor thickness, visual acuity, foveal sensitivity, macular and extramacular rod sensitivity, and kinetic visual field extent. The ALG6 variant, (F304S), was correlated with greater macular cone disease severity and less peripheral rod disease severity. Thus, modifier gene polymorphisms may account for a significant portion of phenotypic variation observed in human genetic disease. However, the consequences of the polymorphisms may be counterintuitively complex in terms of rod and cone populations affected in different regions of the retina.
Keyphrases
- optical coherence tomography
- diabetic retinopathy
- genome wide
- optic nerve
- copy number
- poor prognosis
- binding protein
- dna methylation
- end stage renal disease
- induced apoptosis
- autism spectrum disorder
- endothelial cells
- oxidative stress
- cell death
- ejection fraction
- genome wide identification
- newly diagnosed
- chronic kidney disease
- quality improvement
- circulating tumor
- mass spectrometry
- single molecule
- cell proliferation
- transcription factor
- genome wide analysis
- endoplasmic reticulum stress
- pi k akt
- prognostic factors