Pluripotency-independent induction of human trophoblast stem cells from fibroblasts.
Moriyah NaamaMoran RahamimValery ZayatShulamit SebbanAhmed RadwanDana OrzechRachel LasryAnnael IfrahMohammad JaberOfra SabagHazar YassenAreej KhatibSilvina Epsztejn-LitmanMichal Novoselsky-PerskyKirill MakedonskiNoy DeriDebra Goldman-WohlHoward CedarSimcha YagelRachel EigesYosef BuganimPublished in: Nature communications (2023)
Human trophoblast stem cells (hTSCs) can be derived from embryonic stem cells (hESCs) or be induced from somatic cells by OCT4, SOX2, KLF4 and MYC (OSKM). Here we explore whether the hTSC state can be induced independently of pluripotency, and what are the mechanisms underlying its acquisition. We identify GATA3, OCT4, KLF4 and MYC (GOKM) as a combination of factors that can generate functional hiTSCs from fibroblasts. Transcriptomic analysis of stable GOKM- and OSKM-hiTSCs reveals 94 hTSC-specific genes that are aberrant specifically in OSKM-derived hiTSCs. Through time-course-RNA-seq analysis, H3K4me2 deposition and chromatin accessibility, we demonstrate that GOKM exert greater chromatin opening activity than OSKM. While GOKM primarily target hTSC-specific loci, OSKM mainly induce the hTSC state via targeting hESC and hTSC shared loci. Finally, we show that GOKM efficiently generate hiTSCs from fibroblasts that harbor knockout for pluripotency genes, further emphasizing that pluripotency is dispensable for hTSC state acquisition.
Keyphrases
- embryonic stem cells
- transcription factor
- stem cells
- genome wide
- rna seq
- endothelial cells
- high glucose
- single cell
- genome wide identification
- dna methylation
- extracellular matrix
- diabetic rats
- cell fate
- gene expression
- copy number
- optical coherence tomography
- induced apoptosis
- induced pluripotent stem cells
- dna damage
- oxidative stress
- pluripotent stem cells
- diabetic retinopathy
- genome wide association
- endoplasmic reticulum stress
- bioinformatics analysis