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Mechanistic and structural studies of KDM-catalysed demethylation of histone 1 isotype 4 at lysine 26.

Louise J WalportRichard J HopkinsonRasheduzzaman ChowdhuryYijia ZhangJoanna BonniciRachel SchillerAkane KawamuraChristopher J Schofield
Published in: FEBS letters (2018)
N-Methylation of lysyl residues is widely observed on histone proteins. Using isolated enzymes, we report mechanistic and structural studies on histone lysine demethylase (KDM)-catalysed demethylation of Nε -methylated lysine 26 on histone 1 isotype 4 (H1.4). The results reveal that methylated H1.4K26 is a substrate for all members of the KDM4 subfamily and that KDM4A-catalysed demethylation of H1.4K26me3 peptide is similarly efficient to that of H3K9me3. Crystallographic studies of an H1.4K26me3:KDM4A complex reveal a conserved binding geometry to that of H3K9me3. In the light of the high activity of the KDM4s on this mark, our results suggest JmjC KDM-catalysed demethylation of H1.4K26 may be as prevalent as demethylation on the H3 tail and warrants further investigation in cells.
Keyphrases
  • dna methylation
  • genome wide
  • induced apoptosis
  • gene expression
  • transcription factor
  • oxidative stress
  • cell cycle arrest
  • signaling pathway
  • endoplasmic reticulum stress