Robust normalization and transformation techniques for constructing gene coexpression networks from RNA-seq data.
Kayla A JohnsonArjun KrishnanPublished in: Genome biology (2022)
Based on this work, we provide concrete recommendations on robust procedures for building an accurate coexpression network from an RNA-seq dataset. In addition, researchers can examine all the results in great detail at https://krishnanlab.github.io/RNAseq_coexpression to make appropriate choices for coexpression analysis based on the experimental factors of their RNA-seq dataset.