Discovery of a Therapeutic Agent for Glioblastoma Using a Systems Biology-Based Drug Repositioning Approach.
Ali KaynarMehmet OzcanXiangyu LiHasan TurkezCheng ZhangMathias UhlenSaeed ShoaieAdil MardingluPublished in: International journal of molecular sciences (2024)
Glioblastoma (GBM), a highly malignant tumour of the central nervous system, presents with a dire prognosis and low survival rates. The heterogeneous and recurrent nature of GBM renders current treatments relatively ineffective. In our study, we utilized an integrative systems biology approach to uncover the molecular mechanisms driving GBM progression and identify viable therapeutic drug targets for developing more effective GBM treatment strategies. Our integrative analysis revealed an elevated expression of CHST2 in GBM tumours, designating it as an unfavourable prognostic gene in GBM, as supported by data from two independent GBM cohorts. Further, we pinpointed WZ-4002 as a potential drug candidate to modulate CHST2 through computational drug repositioning. WZ-4002 directly targeted EGFR ( ERBB1 ) and ERBB2 , affecting their dimerization and influencing the activity of adjacent genes, including CHST2 . We validated our findings by treating U-138 MG cells with WZ-4002, observing a decrease in CHST2 protein levels and a reduction in cell viability. In summary, our research suggests that the WZ-4002 drug candidate may effectively modulate CHST2 and adjacent genes, offering a promising avenue for developing efficient treatment strategies for GBM patients.
Keyphrases
- genome wide
- end stage renal disease
- small cell lung cancer
- adverse drug
- drug induced
- newly diagnosed
- ejection fraction
- oxidative stress
- poor prognosis
- emergency department
- gene expression
- high throughput
- peritoneal dialysis
- big data
- cell death
- binding protein
- climate change
- signaling pathway
- cell cycle arrest
- long non coding rna
- cell proliferation
- risk assessment
- amino acid
- artificial intelligence
- deep learning
- pi k akt