Radiogenomics and Texture Analysis to Detect von Hippel-Lindau (VHL) Mutation in Clear Cell Renal Cell Carcinoma.
Federico GrecoValerio D'AndreaBruno Beomonte ZobelCarlo Augusto MallioPublished in: Current issues in molecular biology (2024)
Radiogenomics, a burgeoning field in biomedical research, explores the correlation between imaging features and genomic data, aiming to link macroscopic manifestations with molecular characteristics. In this review, we examine existing radiogenomics literature in clear cell renal cell carcinoma (ccRCC), the predominant renal cancer, and von Hippel-Lindau ( VHL ) gene mutation, the most frequent genetic mutation in ccRCC. A thorough examination of the literature was conducted through searches on the PubMed, Medline, Cochrane Library, Google Scholar, and Web of Science databases. Inclusion criteria encompassed articles published in English between 2014 and 2022, resulting in 10 articles meeting the criteria out of 39 initially retrieved articles. Most of these studies applied computed tomography (CT) images obtained from open source and institutional databases. This literature review investigates the role of radiogenomics, with and without texture analysis, in predicting VHL gene mutation in ccRCC patients. Radiogenomics leverages imaging modalities such as CT and magnetic resonance imaging (MRI), to analyze macroscopic features and establish connections with molecular elements, providing insights into tumor heterogeneity and biological behavior. The investigations explored diverse mutations, with a specific focus on VHL mutation, and applied CT imaging features for radiogenomic analysis. Moreover, radiomics and machine learning techniques were employed to predict VHL gene mutations based on CT features, demonstrating promising results. Additional studies delved into the relationship between VHL mutation and body composition, revealing significant associations with adipose tissue distribution. The review concludes by highlighting the potential role of radiogenomics in guiding targeted and selective therapies.
Keyphrases
- contrast enhanced
- computed tomography
- magnetic resonance imaging
- body composition
- dual energy
- image quality
- machine learning
- adipose tissue
- high resolution
- magnetic resonance
- positron emission tomography
- systematic review
- big data
- ejection fraction
- randomized controlled trial
- type diabetes
- deep learning
- case report
- copy number
- young adults
- insulin resistance
- high fat diet
- patient reported
- gene expression
- climate change
- resistance training
- cancer therapy
- dna methylation
- case control
- single cell
- drug delivery
- data analysis
- peritoneal dialysis