Regulation of S100A10 Gene Expression.
Aleksandra GłowackaPaweł BieganowskiEwelina JurewiczWiesława LeśniakTomasz WilanowskiAnna FilipekPublished in: Biomolecules (2021)
S100A10, a member of the S100 family of Ca2+-binding proteins, is a widely distributed protein involved in many cellular and extracellular processes. The best recognized role of S100A10 is the regulation, via interaction with annexin A2, of plasminogen conversion to plasmin. Plasmin, together with other proteases, induces degradation of the extracellular matrix (ECM), which is an important step in tumor progression. Additionally, S100A10 interacts with 5-hydroxytryptamine 1B (5-HT1B) receptor, which influences neurotransmitter binding and, through that, depressive symptoms. Taking this into account, it is evident that S100A10 expression in the cell should be under strict control. In this work, we summarize available literature data concerning the physiological stimuli and transcription factors that influence S100A10 expression. We also present our original results showing for the first time regulation of S100A10 expression by grainyhead-like 2 transcription factor (GRHL2). By applying in silico analysis, we have found two highly conserved GRHL2 binding sites in the 1st intron of the gene encoding S100A10 protein. Using chromatin immunoprecipitation (ChIP) and luciferase assays, we have shown that GRHL2 directly binds to these sites and that this DNA region can affect transcription of S100A10.
Keyphrases
- transcription factor
- poor prognosis
- binding protein
- extracellular matrix
- gene expression
- depressive symptoms
- dna binding
- genome wide identification
- high throughput
- systematic review
- long non coding rna
- dna methylation
- single cell
- stem cells
- circulating tumor cells
- molecular docking
- big data
- bone marrow
- machine learning
- cell free
- deep learning
- neural network
- sleep quality