Differential expression of genes potentially related to the callogenesis and in situ hybridization of SERK gene in macaw palm (Acrocomia aculeata Jacq.) Lodd. ex Mart.
Filipe Sathler MeiraDaiane Gonzaga RibeiroSamanta Siqueira de CamposLoeni Ludke FalcãoAna Cristina Meneses Mendes GomesDiva Maria de Alencar DusiLucilia Helena MarcellinoAngela MehtaJonny Everson Scherwinski-PereiraPublished in: Protoplasma (2023)
For the purpose of understanding the molecular processes triggered during callus formation in macaw palm, the expression of seven genes potentially involved in this process, identified in previous studies and from the literature, was investigated by RT-qPCR. In addition, in situ hybridization of the SERK gene was performed. Leaf tissues from adult plants from two macaw palm accession were inoculated in a medium combined with Picloram at a concentration of 450 μM to induce callus. The expression analysis was performed from leaf samples from two accessions of different origins (Municipalities of Tiros, MG, and Buriti Vermelho, DF, Brazil), which are characterized as non-responsive (NR) and responsive (R), respectively. The material was collected before callus induction (0 DAI, initial day) and 120 days after callus induction (120 DAI). Genes related to development (SERK, OASA, EF1, ANN1) and stress (LEA, CAT2, and MDAR5) were evaluated. The results obtained showed that all the genes involved with the development had their expressions downregulated at 0 DAI when the accession R was compared with the accession NR. On the other hand, it was possible to observe that these genes were upregulated at 120 DAI. The LEA stress gene showed a tendency to increase expression in the NR accession, while the R accession showed decreased expression and the CAT2 and MDAR5 genes showed upregulation in both accessions. In situ hybridization showed SERK transcripts in the vascular bundles, indicating the expression of SERK in this region, in addition to its expression in calluses. The results obtained in this study support our hypothesis that the regulation of genes involved in the control of oxidative stress and development is crucial for the formation of calluses in macaw palm.
Keyphrases
- genome wide identification
- poor prognosis
- genome wide
- oxidative stress
- genome wide analysis
- transcription factor
- long non coding rna
- binding protein
- bioinformatics analysis
- systematic review
- dna methylation
- gene expression
- dna damage
- cancer therapy
- drug delivery
- cell proliferation
- young adults
- single molecule
- induced apoptosis
- high resolution
- neural network
- heat shock
- heat stress