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Genome-wide characterization, expression analyses, and functional prediction of the NPF family in Brassica napus.

Jing WenPeng-Feng LiFeng RanPeng-Cheng GuoJia-Tian ZhuJin YangLan-Lan ZhangPing ChenJia-Na LiHai Du
Published in: BMC genomics (2020)
We identified 199 B. napus BnaNPFs; these were divided into 11 subfamilies. Allopolyploidy and small-scale duplication events contributed to the immense expansion of BnaNPFs in B. napus. The BnaNPFs had preferential expression patterns in different tissues/organs and wide hormone-induced expression profiles. Four BnaNPFs in the NPF2-1 subfamily may be involved in GLS transport. Our results provide an abundant gene resource for further functional analysis of BnaNPFs.
Keyphrases
  • genome wide
  • poor prognosis
  • genome wide identification
  • binding protein
  • copy number
  • gene expression
  • diabetic rats
  • transcription factor
  • oxidative stress
  • drug induced