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Tumor-agnostic transcriptome-based classifier identifies spatial infiltration patterns of CD8+T cells in the tumor microenvironment and predicts clinical outcome in early-phase and late-phase clinical trials.

Andreas RollerIakov I DavydovPetra C SchwalieMartha L Serrano-SerranoAstrid HellerNicolas StaedlerCláudia S FerreiraGabriele DietmannIrina KlamanAlberto ValdeolivasKonstanty KorskiMichael A Cannarile
Published in: Journal for immunotherapy of cancer (2024)
We provide a new precision immunophenotyping tool based on gene expression that reflects the spatial infiltration patterns of CD8+ lymphocytes in tumors. The classifier enables multiplex analyses and is easy to apply for retrospective, reverse translation approaches as well as for prospective patient enrichment to optimize the response to cancer immunotherapy.
Keyphrases
  • gene expression
  • clinical trial
  • genome wide
  • dna methylation
  • cross sectional
  • rna seq
  • single cell
  • peripheral blood
  • phase ii
  • real time pcr
  • neural network