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An in vitro platform for quantifying cell cycle phase lengths in primary human intestinal stem cells.

Michael J CottonPablo ArielKaiwen ChenVanessa A WalcottMichelle DixitKeith A BreauCaroline M HinesleyKasia KedzioraCynthia Y TangAnna ZhengScott T MagnessJoseph Burclaff
Published in: bioRxiv : the preprint server for biology (2023)
We present two complete platforms for analyzing cell cycle phases in living primary human ISCs. The PIP-FUCCI construct allows for cell cycle phase assignment from one image of living cells, the PIP-H2A construct allows for semi-automated direct quantification of cell cycle phase lengths in human ISCs using our computational pipeline. These platforms hold great promise for future studies on how pharmaceutical agents affect the intestinal epithelium, how cell cycle is regulated in human ISCs, and more.
Keyphrases
  • cell cycle
  • cell proliferation
  • endothelial cells
  • stem cells
  • induced pluripotent stem cells
  • pluripotent stem cells
  • deep learning
  • mesenchymal stem cells
  • fluorescent probe
  • bone marrow
  • single cell