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Protein Association in Solution: Statistical Mechanical Modeling.

Vojko VlachyYurij V KalyuzhnyiBarbara Hribar-LeeKen A Dill
Published in: Biomolecules (2023)
Protein molecules associate in solution, often in clusters beyond pairwise, leading to liquid phase separations and high viscosities. It is often impractical to study these multi-protein systems by atomistic computer simulations, particularly in multi-component solvents. Instead, their forces and states can be studied by liquid state statistical mechanics. However, past such approaches, such as the Derjaguin-Landau-Verwey-Overbeek (DLVO) theory, were limited to modeling proteins as spheres, and contained no microscopic structure-property relations. Recently, this limitation has been partly overcome by bringing the powerful Wertheim theory of associating molecules to bear on protein association equilibria. Here, we review these developments.
Keyphrases
  • protein protein
  • amino acid
  • ionic liquid
  • binding protein
  • molecular dynamics
  • small molecule
  • deep learning
  • molecular dynamics simulations
  • solid state