TCF19 Impacts a Network of Inflammatory and DNA Damage Response Genes in the Pancreatic β-Cell.
Grace H YangDanielle A FontaineSukanya LodhJoseph T BlumerAvtar RoopraDawn Belt DavisPublished in: Metabolites (2021)
Transcription factor 19 (TCF19) is a gene associated with type 1 diabetes (T1DM) and type 2 diabetes (T2DM) in genome-wide association studies. Prior studies have demonstrated that Tcf19 knockdown impairs β-cell proliferation and increases apoptosis. However, little is known about its role in diabetes pathogenesis or the effects of TCF19 gain-of-function. The aim of this study was to examine the impact of TCF19 overexpression in INS-1 β-cells and human islets on proliferation and gene expression. With TCF19 overexpression, there was an increase in nucleotide incorporation without any change in cell cycle gene expression, alluding to an alternate process of nucleotide incorporation. Analysis of RNA-seq of TCF19 overexpressing cells revealed increased expression of several DNA damage response (DDR) genes, as well as a tightly linked set of genes involved in viral responses, immune system processes, and inflammation. This connectivity between DNA damage and inflammatory gene expression has not been well studied in the β-cell and suggests a novel role for TCF19 in regulating these pathways. Future studies determining how TCF19 may modulate these pathways can provide potential targets for improving β-cell survival.
Keyphrases
- gene expression
- cell proliferation
- dna damage response
- cell cycle
- single cell
- oxidative stress
- type diabetes
- rna seq
- transcription factor
- cell cycle arrest
- dna damage
- induced apoptosis
- dna methylation
- glycemic control
- genome wide
- cardiovascular disease
- genome wide identification
- poor prognosis
- endothelial cells
- cell death
- stem cells
- sars cov
- endoplasmic reticulum stress
- adipose tissue
- climate change
- white matter
- binding protein
- long non coding rna
- bioinformatics analysis