Regulation of the expression of MHETase and TPA degradation genes involved in the degradation of PET in Ideonella sakaiensis.
Yuya TanakaKazumi HiragaMasayuki InuiPublished in: The FEBS journal (2024)
Ideonella sakaiensis is a bacterium that can degrade and consume polyethylene terephthalate (PET), a plastic material that was previously considered non-biodegradable. The degradation of PET requires two enzymes, namely poly (ethylene terephthalate) hydrolase (PETase) and mono (2-hydroxyethyl) terephthalate hydrolase (MHETase), which break down PET into terephthalate (TPA) and ethylene glycol (EG), which serve as carbon sources for the bacterium. Previous studies have focused on the enzymatic properties, structure, and mechanism of action of PETase and MHETase. However, the regulation of PETase and MHETase gene expression has not been investigated. This study identified a protein that binds to the MHETase promoter DNA, MHETase gene-regulating protein (MRP) in I. sakaiensis. PET or TPA induced the expression of PETase and MHETase genes. Furthermore, the induction of the MHETase gene was abolished by the deletion of the mrp gene, while the expression of the PETase gene was maintained. In addition, the genes involved in TPA metabolism were not induced in the mrp mutant. Furthermore, the growth of the PET and TPA deteriorated due to mrp mutation. Also, MRP binds to the promoter regions of the MHETase gene and TPA metabolizing genes, but not to the PETase gene promoter. These results suggest that MRP is a transcription factor that activates MHETase and TPA-metabolizing genes.
Keyphrases
- genome wide identification
- genome wide
- transcription factor
- gene expression
- dna methylation
- pet ct
- positron emission tomography
- copy number
- computed tomography
- poor prognosis
- genome wide analysis
- pet imaging
- binding protein
- dna binding
- mass spectrometry
- oxidative stress
- high resolution
- single molecule
- drug induced
- high speed