Gene Expression Profiling of the Extracellular Matrix Signature in Macrophages of Different Activation Status: Relevance for Skin Wound Healing.
Julia EtichManuel KochRaimund WagenerFrank ZauckeMario FabriBent BrachvogelPublished in: International journal of molecular sciences (2019)
The extracellular matrix (ECM) provides structural support for tissue architecture and is a major effector of cell behavior during skin repair and inflammation. Macrophages are involved in all stages of skin repair but only limited knowledge exists about macrophage-specific expression and regulation of ECM components. In this study, we used transcriptome profiling and bioinformatic analysis to define the unique expression of ECM-associated genes in cultured macrophages. Characterization of the matrisome revealed that most genes were constitutively expressed and that several genes were uniquely regulated upon interferon gamma (IFNγ) and dexamethasone stimulation. Among those core matrisome and matrisome-associated components transforming growth factor beta (TGFβ)-induced, matrix metalloproteinase 9 (MMP9), elastin microfibril interfacer (EMILIN)-1, netrin-1 and gliomedin were also present within the wound bed at time points that are characterized by profound macrophage infiltration. Hence, macrophages are a source of ECM components in vitro as well as during skin wound healing, and identification of these matrisome components is a first step to understand the role and therapeutic value of ECM components in macrophages and during wound healing.
Keyphrases
- extracellular matrix
- wound healing
- transforming growth factor
- single cell
- gene expression
- genome wide
- bioinformatics analysis
- poor prognosis
- dendritic cells
- rna seq
- epithelial mesenchymal transition
- adipose tissue
- dna methylation
- soft tissue
- genome wide identification
- low dose
- endothelial cells
- transcription factor
- intellectual disability
- mesenchymal stem cells
- genome wide analysis
- drug induced
- type iii