KIF2C as a potential therapeutic target: insights from lung adenocarcinoma subtype classification and functional experiments.
Zhi XuRui MiaoTao HanYafeng LiuJiawei ZhouJianqiang GuoYingru XingYing BaiJing WuDong HuPublished in: Molecular omics (2024)
Objective : this study evaluates the prognostic relevance of gene subtypes and the role of kinesin family member 2C (KIF2C) in lung cancer progression. Methods : high-expression genes linked to overall survival (OS) and progression-free interval (PFI) were selected from the TCGA-LUAD dataset. Consensus clustering analysis categorized lung adenocarcinoma (LUAD) patients into two subtypes, C1 and C2, which were compared using clinical, drug sensitivity, and immunotherapy analyses. A random forest algorithm pinpointed KIF2C as a prognostic hub gene, and its functional impact was assessed through various assays and in vivo experiments. Results : The study identified 163 key genes and distinguished two LUAD subtypes with differing OS, PFI, pathological stages, drug sensitivity, and immunotherapy response. KIF2C, highly expressed in the C2 subtype, was associated with poor prognosis, promoting cancer cell proliferation, migration, invasion, and epithelial-mesenchymal transition (EMT), with knockdown reducing tumor growth in mice. Conclusion : The research delineates distinct LUAD subtypes with significant clinical implications and highlights KIF2C as a potential therapeutic target for personalized treatment in LUAD.
Keyphrases
- poor prognosis
- epithelial mesenchymal transition
- genome wide
- cell proliferation
- long non coding rna
- end stage renal disease
- genome wide identification
- machine learning
- chronic kidney disease
- deep learning
- ejection fraction
- copy number
- peritoneal dialysis
- skeletal muscle
- squamous cell carcinoma
- gene expression
- metabolic syndrome
- newly diagnosed
- single cell
- papillary thyroid
- rna seq
- risk assessment
- genome wide analysis
- network analysis
- patient reported outcomes
- transcription factor
- drug induced
- wild type