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The plastid genome as a chassis for synthetic biology-enabled metabolic engineering: players in gene expression.

Heidi S SchindelAgnieszka A PiatekCharles Neal StewartScott C Lenaghan
Published in: Plant cell reports (2018)
Owing to its small size, prokaryotic-like molecular genetics, and potential for very high transgene expression, the plastid genome (plastome) is an attractive plant synthetic biology chassis for metabolic engineering. The plastome exists as a homogenous, compact, multicopy genome within multiple-specialized differentiated plastid compartments. Because of this multiplicity, transgenes can be highly expressed. For coordinated gene expression, it is the prokaryotic molecular genetics that is an especially attractive feature. Multiple genes in a metabolic pathway can be expressed in a series of operons, which are regulated at the transcriptional and translational levels with cross talk from the plant's nuclear genome. Key features of each regulatory level are reviewed, as well as some examples of plastome-enabled metabolic engineering. We also speculate about the transformative future of plastid-based synthetic biology to enable metabolic engineering in plants as well as the problems that must be solved before routine plastome-enabled synthetic circuits can be installed.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • transcription factor
  • poor prognosis
  • machine learning
  • risk assessment
  • deep learning
  • clinical practice
  • oxidative stress
  • climate change
  • genome wide identification