Red panda: a novel method for detecting variants in single-cell RNA sequencing.

Adam CornishShrabasti RoychoudhuryKrishna SarmaSuravi PramanikKishor BhakatAndrew DudleyNitish K MishraChittibabu Guda

Published in: BMC genomics (2020)

We show that our method provides a novel and improved mechanism to identify variants in scRNA-seq as compared to currently existing software. However, methods for identification of genomic variants using scRNA-seq data can be still improved.

Keyphrases

single cell
copy number
rna seq
genome wide
high throughput
dna methylation
data analysis
big data
bioinformatics analysis
deep learning