Reference genes for gene expression studies targeting sugarcane infected with Sugarcane mosaic virus (SCMV).

Marcel Fernando da SilvaMarcos Cesar GonçalvesMichael Dos Santos BritoPaula Macedo NóbileLarissa Mara de AndradeCibele Nataliane MedeirosSilvana CresteLuciana Rossini Pinto

Published in: BMC research notes (2019)

The genes Uridylate kinase (UK) and Ubiquitin-conjugating enzyme 18 (UBC18) were the most stable according to GeNorm algorithm and the Pearson correlation coefficients with the BestKeeper index. On the other hand, ribosomal protein L35-4 (RPL1), Actin (ACT) and Ubiquitin1 (UBQ1) were the least stable genes for all algorithms tested.

Keyphrases

gene expression
genome wide
machine learning
bioinformatics analysis
genome wide identification
dna methylation
deep learning
small molecule
genome wide analysis
cancer therapy
protein protein
cross sectional
amino acid
neural network