Login / Signup

Systematic comparison of published host gene expression signatures for bacterial/viral discrimination.

Nicholas BodkinMelissa RossMicah T McClainEmily R KoChristopher W WoodsGeoffrey S GinsburgRicardo HenaoEphraim L Tsalik
Published in: Genome medicine (2022)
In this systematic comparison of 28 host gene expression signatures, we observed differences based on a signature's size and characteristics of the validation population, including age and infection type. However, populations used for signature discovery did not impact performance, underscoring the redundancy among many of these signatures. Furthermore, differential performance in specific populations may only be observable through this type of large-scale validation.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • sars cov
  • high throughput
  • genetic diversity
  • randomized controlled trial
  • clinical evaluation
  • single cell
  • meta analyses