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DNA methylation as a pharmacodynamic marker of glucocorticoid response and glioma survival.

John K WienckeAnnette M MolinaroGayathri WarrierTerri RiceJennifer L ClarkeJennie W TaylorMargaret WrenschHelen M HansenLucie McCoyEmily TangStan J TamakiCourtney M TamakiEmily NissenPaige BracciLucas A SalasDevin C KoestlerBrock C ChristensenZe ZhangKarl T Kelsey
Published in: Nature communications (2022)
Assessing individual responses to glucocorticoid drug therapies that compromise immune status and affect survival outcomes in neuro-oncology is a great challenge. Here we introduce a blood-based neutrophil dexamethasone methylation index (NDMI) that provides a measure of the epigenetic response of subjects to dexamethasone. This marker outperforms conventional approaches based on leukocyte composition as a marker of glucocorticoid response. The NDMI is associated with low CD4 T cells and the accumulation of monocytic myeloid-derived suppressor cells and also serves as prognostic factor in glioma survival. In a non-glioma population, the NDMI increases with a history of prednisone use. Therefore, it may also be informative in other conditions where glucocorticoids are employed. We conclude that DNA methylation remodeling within the peripheral immune compartment is a rich source of clinically relevant markers of glucocorticoid response.
Keyphrases
  • dna methylation
  • gene expression
  • genome wide
  • prognostic factors
  • low dose
  • high dose
  • palliative care
  • cell proliferation
  • free survival
  • cell death
  • cell cycle arrest
  • drug induced