Ze Zhang

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 37

Top Topics

Ankylosing Spondylitis

Dna Methylation

Quality Control

Histone Deacetylase

Top Venues

Clinical epigenetics

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Min Kyung Lee, Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling Iv, Lananh N Nguyen, George J Zanazzi, Lucas A Salas, Brock C Christensen
Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors. Nature communications 15 (1) (2024)
Min Kyung Lee, Ze Zhang, Kartik Sehgal, Rondi A Butler, Hannah Stolrow, Geat Ramush, Keisuke Shirai, Devin C Koestler, Lucas A Salas, John K Wiencke, Robert I Haddad, Karl T Kelsey, Brock C Christensen
Immunomethylomic profiles of long-term head and neck squamous cell carcinoma survivors on immune checkpoint inhibitors. Epigenomics (2024)
Min Kyung Lee, Ze Zhang, Kartik Sehgal, Rondi A Butler, Hannah Stolrow, Geat Ramush, Keisuke Shirai, Devin C Koestler, Lucas A Salas, John K Wiencke, Robert I Haddad, Karl T Kelsey, Brock C Christensen
Immunomethylomic profiles of long-term head and neck squamous cell carcinoma survivors on immune checkpoint inhibitors. Epigenomics 16 (11-12) (2024)
Min Kyung Lee, Ze Zhang, Kartik Sehgal, Rondi A Butler, Hannah Stolrow, Geat Ramush, Keisuke Shirai, Devin C Koestler, Lucas A Salas, John K Wiencke, Robert I Haddad, Karl T Kelsey, Brock C Christensen
Immunomethylomic profiles of long-term head and neck squamous cell carcinoma survivors on immune checkpoint inhibitors. Epigenomics (2024)
Min Kyung Lee, Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling Iv, Lananh N Nguyen, George J Zanazzi, Lucas A Salas, Brock C Christensen
Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors. Nature communications 15 (1) (2024)
Min Kyung Lee, Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling Iv, Lananh N Nguyen, George J Zanazzi, Lucas A Salas, Brock C Christensen
Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors. Nature communications 15 (1) (2024)
Samuel R Reynolds, Ze Zhang, Lucas A Salas, Brock C Christensen
Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer. Clinical epigenetics 16 (1) (2024)
Min Kyung Lee, Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling Iv, Lananh N Nguyen, George J Zanazzi, Lucas A Salas, Brock C Christensen
Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors. Nature communications 15 (1) (2024)
Samuel R Reynolds, Ze Zhang, Lucas A Salas, Brock C Christensen
Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer. Clinical epigenetics 16 (1) (2024)
Samuel R Reynolds, Ze Zhang, Lucas A Salas, Brock C Christensen
Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer. Clinical epigenetics 16 (1) (2024)
Min Kyung Lee, Ze Zhang, Kartik Sehgal, Rondi A Butler, Hannah Stolrow, Geat Ramush, Keisuke Shirai, Devin C Koestler, Lucas A Salas, John K Wiencke, Robert I Haddad, Karl T Kelsey, Brock C Christensen
Immunomethylomic profiles of long-term head and neck squamous cell carcinoma survivors on immune checkpoint inhibitors. Epigenomics 16 (11-12) (2024)
Samuel R Reynolds, Ze Zhang, Lucas A Salas, Brock C Christensen
Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer. Clinical epigenetics 16 (1) (2024)
Samuel R Reynolds, Ze Zhang, Lucas A Salas, Brock C Christensen
Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer. Clinical epigenetics 16 (1) (2024)
Ze Zhang, Hannah G Stolrow, Brock C Christensen, Lucas A Salas
Down Syndrome Altered Cell Composition in Blood, Brain, and Buccal Swab Samples Profiled by DNA-Methylation-Based Cell-Type Deconvolution. Cells 12 (8) (2023)
Ze Zhang, Yunrui Lu, Soroush Vosoughi, Joshua J Levy, Brock C Christensen, Lucas A Salas
HiTAIC: hi erarchical tumor artificial intelligence classifier traces tissue of origin and tumor type in primary and metastasized tumors using DNA methylation. NAR cancer 5 (2) (2023)
Ze Zhang, Yunrui Lu, Soroush Vosoughi, Joshua J Levy, Brock C Christensen, Lucas A Salas
HiTAIC: hi erarchical tumor artificial intelligence classifier traces tissue of origin and tumor type in primary and metastasized tumors using DNA methylation. NAR cancer 5 (2) (2023)
Ze Zhang, Samuel R Reynolds, Hannah G Stolrow, Ji-Qing Chen, Brock C Christensen, Lucas A Salas
Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging cell (2023)
Ze Zhang, Samuel R Reynolds, Hannah G Stolrow, Ji-Qing Chen, Brock C Christensen, Lucas A Salas
Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging cell (2023)
Ze Zhang, Samuel R Reynolds, Hannah G Stolrow, Ji-Qing Chen, Brock C Christensen, Lucas A Salas
Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging cell 23 (3) (2023)
Ze Zhang, Yunrui Lu, Soroush Vosoughi, Joshua J Levy, Brock C Christensen, Lucas A Salas
HiTAIC: hi erarchical tumor artificial intelligence classifier traces tissue of origin and tumor type in primary and metastasized tumors using DNA methylation. NAR cancer 5 (2) (2023)
Ze Zhang, Samuel R Reynolds, Hannah G Stolrow, Ji-Qing Chen, Brock C Christensen, Lucas A Salas
Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging cell 23 (3) (2023)
Ze Zhang, Hannah G Stolrow, Brock C Christensen, Lucas A Salas
Down Syndrome Altered Cell Composition in Blood, Brain, and Buccal Swab Samples Profiled by DNA-Methylation-Based Cell-Type Deconvolution. Cells 12 (8) (2023)
Ze Zhang, Yunrui Lu, Soroush Vosoughi, Joshua J Levy, Brock C Christensen, Lucas A Salas
HiTAIC: hi erarchical tumor artificial intelligence classifier traces tissue of origin and tumor type in primary and metastasized tumors using DNA methylation. NAR cancer 5 (2) (2023)
Ze Zhang, Samuel R Reynolds, Hannah G Stolrow, Ji-Qing Chen, Brock C Christensen, Lucas A Salas
Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging cell 23 (3) (2023)
Ze Zhang, Samuel R Reynolds, Hannah G Stolrow, Ji-Qing Chen, Brock C Christensen, Lucas A Salas
Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging cell 23 (3) (2023)
Ze Zhang, Yunrui Lu, Soroush Vosoughi, Joshua J Levy, Brock C Christensen, Lucas A Salas
HiTAIC: hi erarchical tumor artificial intelligence classifier traces tissue of origin and tumor type in primary and metastasized tumors using DNA methylation. NAR cancer 5 (2) (2023)
Ze Zhang, Hannah G Stolrow, Brock C Christensen, Lucas A Salas
Down Syndrome Altered Cell Composition in Blood, Brain, and Buccal Swab Samples Profiled by DNA-Methylation-Based Cell-Type Deconvolution. Cells 12 (8) (2023)
Ze Zhang, Rondi A Butler, Devin C Koestler, Shelby Bell-Glenn, Gayathri Warrier, Annette M Molinaro, Brock C Christensen, John K Wiencke, Karl T Kelsey, Lucas A Salas
Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages. Clinical epigenetics 14 (1) (2022)
Lucas A Salas, Ze Zhang, Devin C Koestler, Rondi A Butler, Helen M Hansen, Annette M Molinaro, John K Wiencke, Karl T Kelsey, Brock C Christensen
Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling. Nature communications 13 (1) (2022)
Ze Zhang, Rondi A Butler, Devin C Koestler, Shelby Bell-Glenn, Gayathri Warrier, Annette M Molinaro, Brock C Christensen, John K Wiencke, Karl T Kelsey, Lucas A Salas
Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages. Clinical epigenetics 14 (1) (2022)
Ze Zhang, Min Kyung Lee, Laurent Perreard, Karl T Kelsey, Brock C Christensen, Lucas A Salas
Navigating the hydroxymethylome: experimental biases and quality control tools for the tandem bisulfite and oxidative bisulfite Illumina microarrays. Epigenomics 14 (3) (2022)
Ze Zhang, Rondi A Butler, Devin C Koestler, Shelby Bell-Glenn, Gayathri Warrier, Annette M Molinaro, Brock C Christensen, John K Wiencke, Karl T Kelsey, Lucas A Salas
Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages. Clinical epigenetics 14 (1) (2022)
Ze Zhang, John K Wiencke, Karl T Kelsey, Devin C Koestler, Brock C Christensen, Lucas A Salas
HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylation data. Journal of translational medicine 20 (1) (2022)
Ze Zhang, Rondi A Butler, Devin C Koestler, Shelby Bell-Glenn, Gayathri Warrier, Annette M Molinaro, Brock C Christensen, John K Wiencke, Karl T Kelsey, Lucas A Salas
Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages. Clinical epigenetics 14 (1) (2022)
Ze Zhang, Rondi A Butler, Devin C Koestler, Shelby Bell-Glenn, Gayathri Warrier, Annette M Molinaro, Brock C Christensen, John K Wiencke, Karl T Kelsey, Lucas A Salas
Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages. Clinical epigenetics 14 (1) (2022)
John K Wiencke, Annette M Molinaro, Gayathri Warrier, Terri Rice, Jennifer L Clarke, Jennie W Taylor, Margaret Wrensch, Helen M Hansen, Lucie McCoy, Emily Tang, Stan J Tamaki, Courtney M Tamaki, Emily Nissen, Paige Bracci, Lucas A Salas, Devin C Koestler, Brock C Christensen, Ze Zhang, Karl T Kelsey
DNA methylation as a pharmacodynamic marker of glucocorticoid response and glioma survival. Nature communications 13 (1) (2022)
Ze Zhang, Rondi A Butler, Devin C Koestler, Shelby Bell-Glenn, Gayathri Warrier, Annette M Molinaro, Brock C Christensen, John K Wiencke, Karl T Kelsey, Lucas A Salas
Comparative analysis of the DNA methylation landscape in CD4, CD8, and B memory lineages. Clinical epigenetics 14 (1) (2022)