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Optimal Mode Combination in the Multiconfiguration Time-Dependent Hartree Method through Multivariate Statistics: Factor Analysis and Hierarchical Clustering.

David Mendive-TapiaHans-Dieter MeyerOriol Vendrell
Published in: Journal of chemical theory and computation (2023)
The multiconfiguration time-dependent Hartree (MCTDH) method and its multilayer extension (ML-MCTDH) are powerful algorithms for the efficient computation of nuclear quantum dynamics in high-dimensional systems. By providing time-dependent variational orbitals and an optimal choice of layered effective degrees of freedom, one is able to reduce the computational cost to an amenable number of configurations. However, choices related to selecting properly the mode grouping and tensor tree are strongly system dependent and, thus far, subjectively based on intuition and/or experience. Therefore, herein we detail a new protocol based on multivariate statistics─more specifically, factor analysis and hierarchical clustering─for a reliable and convenient guiding in the optimal design of such complex "system-of-systems" tensor-network decompositions. The advantages of employing the new algorithm and its applicability are tested on water and two floppy protonated water clusters with large amplitude motions.
Keyphrases
  • density functional theory
  • machine learning
  • molecular dynamics
  • randomized controlled trial
  • single cell
  • data analysis
  • rna seq
  • network analysis