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Conformational Change from U- to I-Shape of Ion Transporters Facilitates K + Transport across Lipid Bilayers.

Mengyao MiaoXueguang ShaoWensheng Cai
Published in: The journal of physical chemistry. B (2022)
We have investigated, at the atomic level, the ion-fishing mechanism underlying the ion transport across membranes mediated by an artificial ion transporter composed of a hydroxyl-rich cholesterol group, a flexible alkyl chain, and a crown ether. Our results show that the transporter can spontaneously insert into the membrane and switch between the folded (U-shaped) and extended (I-shaped) conformations. The free-energy profile associated with the conformational transition indicates that compared with the U-shaped conformation of the transporter, the I-shaped one is thermodynamically more favorable. Furthermore, the free-energy profiles describing the ion translocation reveal that the transporter capturing the ion in U-shape on one side of the membrane and releasing it in I-shape on the other side constitutes a key way for the highly efficient transport of K + ions. We present herewith a rigorous and rational framework to decipher the detailed ion-fishing mechanism of transmembrane ion transport with exceptionally high activity.
Keyphrases
  • highly efficient
  • molecular dynamics simulations
  • molecular dynamics
  • gene expression
  • mass spectrometry
  • quantum dots
  • fatty acid