Current State and Future of Polygenic Risk Scores in Cardiometabolic Disease: A Scoping Review.
Jobanjit S PhulkaMishal AshrafBeenu K BajwaGuillaume ParéZachary W M LaksmanPublished in: Circulation. Genomic and precision medicine (2023)
A polygenic risk score (PRS) is derived from a genome-wide association study and represents an aggregate of thousands of single-nucleotide polymorphisms that provide a baseline estimate of an individual's genetic risk for a specific disease or trait at birth. However, it remains unclear how PRSs can be used in clinical practice. We provide an overview of the PRSs related to cardiometabolic disease and discuss the evidence supporting their clinical applications and limitations. The Preferred Reporting Items For Systematic Reviews and Meta-Analysis Extension for Scoping Reviews protocol was used to conduct a scoping review of the MEDLINE, EMBASE, and CENTRAL databases. Across the 4863 studies screened, 82 articles met the inclusion criteria. The most common PRS related to coronary artery disease, followed by hypertension and cerebrovascular disease. Limited ancestral diversity was observed in the study sample populations. Most studies included only individuals of European ancestry. The predictive performance of most PRSs was similar to or superior to traditional risk factors. More than half of the included studies reported an integrated risk model combining a derived PRS and clinical risk tools such as the Framingham Risk Score and Pooled Cohort Equations. The inclusion of a PRS into a clinical risk model tended to improve predictive accuracy consistently. This scoping review is the first of its kind and reports strong evidence for the clinical utility of PRSs in coronary artery disease, hypertension, cerebrovascular disease, and atrial fibrillation. However, most PRSs are generated in cohorts of European ancestry, which likely contributes to a lack of PRS transferability across different ancestral groups. Future prospective studies should focus on further establishing the clinical utility of PRSs and ensuring diversity is incorporated into genome-wide association study cohorts.
Keyphrases
- genome wide association study
- coronary artery disease
- atrial fibrillation
- blood pressure
- pregnant women
- risk factors
- randomized controlled trial
- gene expression
- heart failure
- clinical trial
- emergency department
- cardiovascular events
- acute coronary syndrome
- left ventricular
- cardiovascular disease
- type diabetes
- genome wide
- coronary artery bypass grafting
- tyrosine kinase
- dna methylation
- catheter ablation
- big data
- electronic health record
- deep learning
- venous thromboembolism
- direct oral anticoagulants