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Deep learning for the PSIPRED Protein Analysis Workbench.

Daniel W A BuchanLewis MoffatAndy LauShaun M KandathilDavid T Jones
Published in: Nucleic acids research (2024)
The PSIRED Workbench is a long established and popular bioinformatics web service offering a wide range of machine learning based analyses for characterizing protein structure and function. In this paper we provide an update of the recent additions and developments to the webserver, with a focus on new Deep Learning based methods. We briefly discuss some trends in server usage since the publication of AlphaFold2 and we give an overview of some upcoming developments for the service. The PSIPRED Workbench is available at http://bioinf.cs.ucl.ac.uk/psipred.
Keyphrases
  • deep learning
  • machine learning
  • protein protein
  • mental health
  • artificial intelligence
  • healthcare
  • convolutional neural network
  • amino acid
  • binding protein
  • small molecule
  • big data
  • cross sectional