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Inferring cell-type-specific causal gene regulatory networks during human neurogenesis.

Nil AygünDan LiangWesley L CrouseGregory R KeeleMichael I LoveJason L Stein
Published in: Genome biology (2023)
In this study, we identify cell-type-specific causal gene regulatory networks whereby the impacts of variants on gene expression were mediated by chromatin accessibility or distal gene expression. Identification of these causal paths will enable identifying and prioritizing actionable regulatory targets perturbing these key processes during neurodevelopment.
Keyphrases
  • gene expression
  • dna methylation
  • endothelial cells
  • transcription factor
  • minimally invasive
  • copy number
  • genome wide
  • pluripotent stem cells
  • induced pluripotent stem cells
  • cerebral ischemia
  • brain injury