Applied and environmental microbiology

Keyphrases

Publications

volume 90, number 8, 2024

Chaofan Ai, Peng Cui, Chen Liu, Jiawei Wu, Yuan Xu, Xiaolong Liang, Qiu-E Yang, Xiang Tang, Shungui Zhou, Hanpeng Liao, Ville-Perti Friman
Viral and thermal lysis facilitates transmission of antibiotic resistance genes during composting. Applied and environmental microbiology 90 (8) (2024)
Kampachiro Urasaki, Yuki Morono, Go-Ichiro Uramoto, Kentaro Uesugi, Masahiro Yasutake, Manato Akishiba, Guangze Guo, Yu-You Li, Kengo Kubota
Nondestructive and three-dimensional visualization by identifying elements using synchrotron radiation microscale X-ray CT reveals microbial and cavity distributions in anaerobic granular sludge. Applied and environmental microbiology 90 (8) (2024)
Dongyue Lyu, Qun Duan, Ran Duan, Shuai Qin, Xiaojin Zheng, Xinmin Lu, Asaiti Bukai, Peng Zhang, Haonan Han, Zhaokai He, Hanyu Sha, Di Wu, Meng Xiao, Huaiqi Jing, Xin Wang
Symbiosis of a lytic bacteriophage and Yersinia pestis and characteristics of plague in Marmota himalayana . Applied and environmental microbiology 90 (8) (2024)
Yezhi Fu, Erin M Nawrocki, Nkuchia M M'ikanatha, Edward G Dudley
Host species shapes genotype, antimicrobial resistance, and virulence profiles of enterotoxigenic Escherichia coli (ETEC) from livestock in the United States. Applied and environmental microbiology 90 (8) (2024)
David Hsu, Jack R Flynn, Christopher J Schuler, Cara M Santelli, Brandy M Toner, Daniel R Bond, Jeffrey A Gralnick
Isolation and genomic analysis of " Metallumcola ferriviriculae" MK1, a Gram-positive, Fe(III)-reducing bacterium from the Soudan Underground Mine, an iron-rich Martian analog site. Applied and environmental microbiology 90 (8) (2024)
Shuo Hou, Cong Gao, Jia Liu, Xiulai Chen, Wanqing Wei, Wei Song, Guipeng Hu, Xiaomin Li, Jing Wu, Liming Liu
Med3-mediated NADPH generation to help Saccharomyces cerevisiae tolerate hyperosmotic stress. Applied and environmental microbiology 90 (8) (2024)
Tito D Peña-Montenegro, Sara Kleindienst, Andrew E Allen, A Murat Eren, John P McCrow, Jonathan Arnold, Samantha B Joye
Metatranscriptomic response of deep ocean microbial populations to infusions of oil and/or synthetic chemical dispersant. Applied and environmental microbiology 90 (8) (2024)
Yating Li, Tong Xu, Yanqin Tu, Tong Li, Yifeng Wei, Yan Zhou
An aldolase-dependent phloroglucinol degradation pathway in Collinsella sp. zg1085. Applied and environmental microbiology 90 (8) (2024)
Josefina Duran-Bedolla, Juan Téllez-Sosa, Paola Bocanegra-Ibarias, Astrid Schilmann, Sugey Bravo-Romero, Fernando Reyna-Flores, Tania Villa-Reyes, Humberto Barrios-Camacho
Citrobacter spp. and Enterobacter spp. as reservoirs of carbapenemase bla NDM and bla KPC resistance genes in hospital wastewater. Applied and environmental microbiology 90 (8) (2024)
Briana C Kubik, James F Holden
Non-thermodynamic factors affect competition between thermophilic chemolithoautotrophs from deep-sea hydrothermal vents. Applied and environmental microbiology 90 (8) (2024)
Mikari Asakawa, Shinya Kageyama, Heba Shehta Said, Jiale Ma, Shino Suma, Michiko Furuta, Toru Takeshita
Association of oral fungal profiles with health status and bacterial composition in elderly adults receiving community support and home care service. Applied and environmental microbiology 90 (8) (2024)
Le Li, Qiang Li, Yuting Xiao, Jiangshan Ma, Gao-Qiang Liu
H-NS involved in positive regulation of glycerol dehydratase gene expression in Klebsiella pneumoniae 2e. Applied and environmental microbiology 90 (8) (2024)
Anthony R Prave
Environmental microbiology explains the largest positive carbon isotope excursion in Earth history, the Lomagundi-Jatuli Event. Applied and environmental microbiology 90 (8) (2024)
Hannah McKinnon Reish, Lindsey Dewey, Lucas J Kirschman
A host of issues: pseudoreplication in host-microbiota studies. Applied and environmental microbiology 90 (8) (2024)
Kosuke Kanno, Riko Kuriki, Yoko Yasuno, Tetsuro Shinada, Tomokazu Ito, Hisashi Hemmi
Archaeal mevalonate pathway in the uncultured bacterium Candidatus Promineifilum breve belonging to the phylum Chloroflexota. Applied and environmental microbiology 90 (8) (2024)
Shan Shan Sun, Tian Tian He, Shu Ya Zhang, Xiu-Jun Yu, Chang Chen, Zubair Ahmed Laghari, Pin Nie, Hai Xia Xie
T3SS protein EsrC binds to the lacI -like operator of type 1 fimbrial operon to suppress adhesion of Edwardsiella piscicida . Applied and environmental microbiology 90 (8) (2024)
Tapiwanashe Annamary Mhlanga, Simbarashe Chitanga, Sonja Matthee, Mokgadi Pulane Malatji, Samson Mukaratirwa
Prevalence and genetic diversity of Bartonella spp. in wild small mammals from South Africa. Applied and environmental microbiology 90 (8) (2024)
James Larson, Monika Tokmina-Lukaszewska, Devon Payne, Rachel L Spietz, Hunter Fausset, Md Gahangir Alam, Brooklyn K Brekke, Jordan Pauley, Ethan J Hasenoehrl, Eric M Shepard, Eric S Boyd, Brian Bothner
Impact of mineral and non-mineral sources of iron and sulfur on the metalloproteome of Methanosarcina barkeri . Applied and environmental microbiology 90 (8) (2024)
Xixi Li, Chen Zhang, Shenao Li, Sixuan Liang, Xuefei Xu, Zhe Zhao
Quorum sensing positively regulates CPS-dependent Autographiviridae phage infection in Vibrio alginolyticus . Applied and environmental microbiology 90 (8) (2024)
Erick V S Motta, Tyler K de Jong, Alejandra Gage, Joseph A Edwards, Nancy A Moran
Glyphosate effects on growth and biofilm formation in bee gut symbionts and diverse associated bacteria. Applied and environmental microbiology 90 (8) (2024)
Nga Man Lam, Tsz Fung Tsang, Jiayi Qu, Man Wai Tsang, Yuan Tao, Cheuk Hei Kan, Qingyu Zou, King Hong Chan, Adrian Jun Chu, Cong Ma, Xiao Yang
Development of a luciferase-based Gram-positive bacterial reporter system for the characterization of antimicrobial agents. Applied and environmental microbiology 90 (8) (2024)
Hengyu Xi, Yalu Ji, Yao Fu, Chong Chen, Wenyu Han, Jingmin Gu
Biological characterization of the phage lysin AVPL and its efficiency against Aerococcus viridans -induced mastitis in a murine model. Applied and environmental microbiology 90 (8) (2024)
Yu He, Shiyan Zhuo, Donghao Gao, Yue Pan, Yuhan Huang, Jie Pan, Yongguang Jiang, Yidan Hu, Jinzhi Guo, Qin Lin, Robert A Sanford, Weimin Sun, Jianying Shang, Na Wei, Shuming Peng, Zhou Jiang, Shuyi Li, Yongzhe Li, Yiran Dong, Liang Shi
Viral communities in a pH>10 serpentinite-like environment: insight into diversity and potential roles in modulating the microbiomes by bioactive vitamin B 9 synthesis. Applied and environmental microbiology 90 (8) (2024)
Sriya Sunil, Tamara Walsky, Mikayla Henry, Leonie Kemmerling, Magdalena Pajor, Xiaodong Guo, Sarah I Murphy, Renata Ivanek, Martin Wiedmann
A longitudinal study on the bacterial quality of baby spinach cultivated in Arizona and California. Applied and environmental microbiology 90 (8) (2024)
Nick Jensen, Maria Maldonado-Gomez, Nithya Krishnakumar, Cheng-Yu Weng, Juan Castillo, Dale Razi, Karen Kalanetra, J Bruce German, Carlito B Lebrilla, David A Mills, Diana H Taft
Dietary fiber monosaccharide content alters gut microbiome composition and fermentation. Applied and environmental microbiology 90 (8) (2024)
Robin Bonné, Ian P G Marshall, Jesper J Bjerg, Ugo Marzocchi, Jean Manca, Lars Peter Nielsen, Kartik S Aiyer
Interaction of living cable bacteria with carbon electrodes in bioelectrochemical systems. Applied and environmental microbiology 90 (8) (2024)
Chamia C Chatman, Elena G Olson, Allison J Freedman, Dana K Dittoe, Steven C Ricke, Erica L-W Majumder
Co-exposure to polyethylene fiber and Salmonella enterica serovar Typhimurium alters microbiome and metabolome of in vitro chicken cecal mesocosms. Applied and environmental microbiology 90 (8) (2024)
Wei-Chu Wang, Jungshan Chang, Chi-Hsin Lee, Yu-Wei Chiang, Sy-Jye Leu, Yan-Chiao Mao, Jen-Ron Chiang, Chun-Kai Yang, Chao-Jung Wu, Yi-Yuan Yang
Phage display-derived alpaca nanobodies as potential therapeutics for Naja atra snake envenomation. Applied and environmental microbiology 90 (8) (2024)
Zachary Jansen, Abdulaziz Alameri, Qiyao Wei, Devon L Kulhanek, Andrew R Gilmour, Sean Halper, Nathan D Schwalm, Ross Thyer
A modular toolkit for environmental Rhodococcus , Gordonia , and Nocardia enables complex metabolic manipulation. Applied and environmental microbiology 90 (8) (2024)
Chamia C Chatman, Elena G Olson, Allison J Freedman, Dana K Dittoe, Steven C Ricke, Erica L-W Majumder
Co-exposure to polyethylene fiber and Salmonella enterica serovar Typhimurium alters microbiome and metabolome of in vitro chicken cecal mesocosms. Applied and environmental microbiology 90 (8) (2024)
Alicia Froidurot, Emmanuel Jacotot, Samy Julliand, Pauline Grimm, Véronique Julliand
Fibrobacter sp. HC4, a newly isolated strain, demonstrates a high cellulolytic activity as revealed by enzymatic measurements and in vitro assay. Applied and environmental microbiology 90 (8) (2024)
Siqi Li, Weiping Zhang
Mapping the functional B-cell epitopes of Shigella invasion plasmid antigen D (IpaD). Applied and environmental microbiology 90 (8) (2024)
Jia-He Hung, Shi-Min Zhang, Shir-Ly Huang
Nitrate promotes the growth and the production of short-chain fatty acids and tryptophan from commensal anaerobe Veillonella dispar in the lactate-deficient environment by facilitating the catabolism of glutamate and aspartate. Applied and environmental microbiology 90 (8) (2024)
Le Li, Qiang Li, Yuting Xiao, Jiangshan Ma, Gao-Qiang Liu
H-NS involved in positive regulation of glycerol dehydratase gene expression in Klebsiella pneumoniae 2e. Applied and environmental microbiology 90 (8) (2024)
Yaping Lu, Huilan Ren, Zhongle Li, Haixia Leng, Aoqiang Li, Wentao Dai, Long Huang, Jiang Feng, Keping Sun
Microbiota diversity and anti- Pseudogymnoascus destructans bacteria isolated from Myotis pilosus skin during late hibernation. Applied and environmental microbiology 90 (8) (2024)
Sung-Geun Woo, Nils J H Averesch, Aaron J Berliner, Joerg S Deutzmann, Vince E Pane, Sulogna Chatterjee, Craig S Criddle
Isolation and characterization of a Halomonas species for non-axenic growth-associated production of bio-polyesters from sustainable feedstocks. Applied and environmental microbiology 90 (8) (2024)
Chiaki Kimura-Ishimaru, Simiao Liang, Katsuro Matsuse, Ryo Iwama, Kenta Sato, Natsuhito Watanabe, Satoshi Tezaki, Hiroyuki Horiuchi, Ryouichi Fukuda
Mar1, a high mobility group box protein, regulates n -alkane adsorption and cell morphology of the dimorphic yeast Yarrowia lipolytica . Applied and environmental microbiology 90 (8) (2024)
Raymond Pasman, Jianbo Zhang, Sebastiaan A J Zaat, Stanley Brul, Bastiaan P Krom
A customizable and defined medium supporting culturing of Candida albicans , Staphylococcus aureus , and human oral epithelial cells. Applied and environmental microbiology 90 (8) (2024)
Hao Guo, Li-Xiang Mo, Xue-Mei Luo, Shuai Zhao, Jia-Xun Feng
Mutual regulation of novel transcription factors RsrD and RsrE positively modulates the production of raw-starch-degrading enzyme in Penicillium oxalicum . Applied and environmental microbiology 90 (8) (2024)
Jin Chen, Ye Cui, Qingchen Xiao, Keqin Lin, Boyan Wang, Jing Zhou, Xiaoyu Li
Difference in microbial community structure along a gradient of crater altitude: insights from the Nushan volcano. Applied and environmental microbiology 90 (8) (2024)
Jian Wang, Yaping Wang, Shouquan Lu, Haibo Lou, XiaoBing Wang, Wei Wang
AlgU mediates hyperosmotic tolerance in Pseudomonas protegens SN15-2 by regulating membrane stability, ROS scavenging, and osmolyte synthesis. Applied and environmental microbiology 90 (8) (2024)
Sriya Sunil, Tamara Walsky, Mikayla Henry, Leonie Kemmerling, Magdalena Pajor, Xiaodong Guo, Sarah I Murphy, Renata Ivanek, Martin Wiedmann
A longitudinal study on the bacterial quality of baby spinach cultivated in Arizona and California. Applied and environmental microbiology 90 (8) (2024)
James E Merrett, Monica Nolan, Leon Michael Hartman, Nijoy John, Brianna Flynn, Louise Baker, Christelle Schang, David McCarthy, David Lister, Ngai Ning Cheng, Nick Crosbie, Rachael Poon, Aaron R Jex
Highly sensitive wastewater surveillance of SARS-CoV-2 variants by targeted next-generation amplicon sequencing provides early warning of incursion in Victoria, Australia. Applied and environmental microbiology 90 (8) (2024)
Kristina M Ceres, Jordan D Zehr, Chloe Murrell, Jean K Millet, Qi Sun, Holly C McQueary, Alanna Horton, Casey Cazer, Kelly Sams, Guillaume Reboul, William B Andreopoulos, Patrick K Mitchell, Renee Anderson, Rebecca Franklin-Guild, Brittany D Cronk, Bryce J Stanhope, Claire R Burbick, Rebecca Wolking, Laura Peak, Yan Zhang, Rebeccah McDowall, Aparna Krishnamurthy, Durda Slavic, Prabhjot Kaur Sekhon, Gregory H Tyson, Olgica Ceric, Michael J Stanhope, Laura B Goodman
Evolutionary genomic analyses of canine E. coli infections identify a relic capsular locus associated with resistance to multiple classes of antimicrobials. Applied and environmental microbiology 90 (8) (2024)
Nick Jensen, Maria Maldonado-Gomez, Nithya Krishnakumar, Cheng-Yu Weng, Juan Castillo, Dale Razi, Karen Kalanetra, J Bruce German, Carlito B Lebrilla, David A Mills, Diana H Taft
Dietary fiber monosaccharide content alters gut microbiome composition and fermentation. Applied and environmental microbiology 90 (8) (2024)
Claire Gibson, Shameem Jauffur, Bing Guo, Dominic Frigon
Activated sludge microbial community assembly: the role of influent microbial community immigration. Applied and environmental microbiology 90 (8) (2024)
Verlaine J Timms, Eby Sim, Keenan Pey, Vitali Sintchenko
Can genomics and meteorology predict outbreaks of legionellosis in urban settings? Applied and environmental microbiology 90 (8) (2024)
Xiating Gao, Xuetong Wang, Qiaoqiao Mao, Rongjing Xu, Xiaohui Zhou, Yue Ma, Qin Liu, Yuanxing Zhang, Qiyao Wang
Second Correction for Gao et al., "VqsA, a Novel LysR-Type Transcriptional Regulator, Coordinates Quorum Sensing (QS) and Is Controlled by QS To Regulate Virulence in the Pathogen Vibrio alginolyticus ". Applied and environmental microbiology 90 (8) (2024)
Claire Gibson, Shameem Jauffur, Bing Guo, Dominic Frigon
Activated sludge microbial community assembly: the role of influent microbial community immigration. Applied and environmental microbiology 90 (8) (2024)
Wei-Chu Wang, Jungshan Chang, Chi-Hsin Lee, Yu-Wei Chiang, Sy-Jye Leu, Yan-Chiao Mao, Jen-Ron Chiang, Chun-Kai Yang, Chao-Jung Wu, Yi-Yuan Yang
Phage display-derived alpaca nanobodies as potential therapeutics for Naja atra snake envenomation. Applied and environmental microbiology 90 (8) (2024)