EURASIP journal on bioinformatics & systems biology

Keyphrases

Publications

volume 2017, number 1, 2017

Oyetunji E Ogundijo, Abdulkadir Elmas, Xiaodong Wang
Reverse engineering gene regulatory networks from measurement with missing values. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)
Danila Vella, Italo Zoppis, Giancarlo Mauri, Pierluigi Mauri, Dario Di Silvestre
From protein-protein interactions to protein co-expression networks: a new perspective to evaluate large-scale proteomic data. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)
Xiangfang Li, Oluwaseyi Omotere, Lijun Qian, Edward R Dougherty
Review of stochastic hybrid systems with applications in biological systems modeling and analysis. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)
Fabio Nikolay, Marius Pesavento, George Kritikos, Nassos Typas
Learning directed acyclic graphs from large-scale genomics data. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)
Noura Dridi, Audrey Giremus, Jean-Francois Giovannelli, Caroline Truntzer, Melita Hadzagic, Jean-Philippe Charrier, Laurent Gerfault, Patrick Ducoroy, Bruno Lacroix, Pierre Grangeat, Pascal Roy
Bayesian inference for biomarker discovery in proteomics: an analytic solution. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)
Gurusamy Murugesan, Sabenabanu Abdulkadhar, Balu Bhasuran, Jeyakumar Natarajan
BCC-NER: bidirectional, contextual clues named entity tagger for gene/protein mention recognition. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)
Wael Louis, Shahad Abdulnour, Sahar Javaher Haghighi, Dimitrios Hatzinakos
On biometric systems: electrocardiogram Gaussianity and data synthesis. EURASIP journal on bioinformatics & systems biology 2017 (1) (2017)

volume 2017, 2017

Jianbo Yuan, Chester Holtz, Tristram Smith, Jiebo Luo
Autism spectrum disorder detection from semi-structured and unstructured medical data. EURASIP journal on bioinformatics & systems biology 2017 (2017)
Wael Louis, Shahad Abdulnour, Sahar Javaher Haghighi, Dimitrios Hatzinakos
On biometric systems: electrocardiogram Gaussianity and data synthesis. EURASIP journal on bioinformatics & systems biology 2017 (2017)
Shuai Huang, Jiayu Zhou, Zhangyang Wang, Qing Ling, Yang Shen
Biomedical informatics with optimization and machine learning. EURASIP journal on bioinformatics & systems biology 2017 (2017)

volume 2017, number 1, 2016

Shriprakash Sinha
A pedagogical walkthrough of computational modeling and simulation of Wnt signaling pathway using static causal models in MATLAB. EURASIP journal on bioinformatics & systems biology 2017 (1) (2016)

volume 2016, number 1, 2016

Mircea Dumitru, Ali Mohammad-Djafari, Simona Baghai Sain
Precise periodic components estimation for chronobiological signals through Bayesian Inference with sparsity enforcing prior. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Dawit Nigatu, Werner Henkel, Patrick Sobetzko, Georgi Muskhelishvili
Relationship between digital information and thermodynamic stability in bacterial genomes. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
William Giroldini, Luciano Pederzoli, Marco Bilucaglia, Simone Melloni, Patrizio Tressoldi
A new method to detect event-related potentials based on Pearson's correlation. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Mostafa A Salama, Aboul Ella Hassanien, Ahmad Mostafa
The prediction of virus mutation using neural networks and rough set techniques. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Inci M Baytas, Kaixiang Lin, Fei Wang, Anil K Jain, Jiayu Zhou
Stochastic convex sparse principal component analysis. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Mohammad Akbari, Xia Hu, Liqiang Nie, Tat-Seng Chua
Towards organizing health knowledge on community-based health services. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Ting Chen, Ulisses M Braga-Neto
Bayesian estimation of the discrete coefficient of determination. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Amin Zollanvari, Edward R Dougherty
Incorporating prior knowledge induced from stochastic differential equations in the classification of stochastic observations. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Yijie Wang, Xiaoning Qian
Stochastic block coordinate Frank-Wolfe algorithm for large-scale biological network alignment. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Siamak Zamani Dadaneh, Xiaoning Qian
Bayesian module identification from multiple noisy networks. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Kenta Kamatuka, Masahiro Hattori, Tomoyasu Sugiyama
shRNA target prediction informed by comprehensive enquiry (SPICE): a supporting system for high-throughput screening of shRNA library. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Lei Huang, Li Liao, Cathy H Wu
Inference of protein-protein interaction networks from multiple heterogeneous data. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Nurgazy Sulaimanov, Heinz Koeppl
Graph reconstruction using covariance-based methods. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Tianchuan Du, Li Liao, Cathy H Wu
Enhancing interacting residue prediction with integrated contact matrix prediction in protein-protein interaction. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Victor Andrei, Ognjen Arandjelović
Complex temporal topic evolution modelling using the Kullback-Leibler divergence and the Bhattacharyya distance. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Hiroko K Solvang, Arnoldo Frigessi, Fateme Kaveh, Margit L H Riis, Torben Lüders, Ida R K Bukholm, Vessela N Kristensen, Bettina K Andreassen
Gene expression analysis supports tumor threshold over 2.0 cm for T-category breast cancer. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Xia Hu, Peter D Reaven, Aramesh Saremi, Ninghao Liu, Mohammad Ali Abbasi, Huan Liu, Raymond Q Migrino, null null
Machine learning to predict rapid progression of carotid atherosclerosis in patients with impaired glucose tolerance. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Kuan Wang, Jiebo Luo
Detecting Visually Observable Disease Symptoms from Faces. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)
Yan Jin, Yi Su, Xiao-Hua Zhou, Shuai Huang, null null
Heterogeneous multimodal biomarkers analysis for Alzheimer's disease via Bayesian network. EURASIP journal on bioinformatics & systems biology 2016 (1) (2016)

volume 2015, number 1, 2015

David Murrugarra, Elena S Dimitrova
Molecular network control through boolean canalization. EURASIP journal on bioinformatics & systems biology 2015 (1) (2015)
Lori A Dalton, Mohammadmahdi R Yousefi
On optimal Bayesian classification and risk estimation under multiple classes. EURASIP journal on bioinformatics & systems biology 2015 (1) (2015)
Lipi Acharya, Robert Reynolds, Dongxiao Zhu
Network inference through synergistic subnetwork evolution. EURASIP journal on bioinformatics & systems biology 2015 (1) (2015)
Piyali Ganguli, Saikat Chowdhury, Shomeek Chowdhury, Ram Rup Sarkar
Identification of Th1/Th2 regulatory switch to promote healing response during leishmaniasis: a computational approach. EURASIP journal on bioinformatics & systems biology 2015 (1) (2015)
Haitham Gabr, Juan Carlos Rivera-Mulia, David M Gilbert, Tamer Kahveci
Computing interaction probabilities in signaling networks. EURASIP journal on bioinformatics & systems biology 2015 (1) (2015)
Garri Davydyan
Carcinogenesis: alterations in reciprocal interactions of normal functional structure of biologic systems. EURASIP journal on bioinformatics & systems biology 2015 (1) (2015)

volume 2015, 2015

Jie Hou, Gary Stacey, Jianlin Cheng
Exploring soybean metabolic pathways based on probabilistic graphical model and knowledge-based methods. EURASIP journal on bioinformatics & systems biology 2015 (2015)
Gulzar A Khuwaja, Sahar Javaher Haghighi, Dimitrios Hatzinakos
40-Hz ASSR fusion classification system for observing sleep patterns. EURASIP journal on bioinformatics & systems biology 2015 (2015)
Mohammadmahdi R Yousefi, Lori A Dalton
Optimal cancer prognosis under network uncertainty. EURASIP journal on bioinformatics & systems biology 2015 (2015)
Antti Larjo, Harri Lähdesmäki
Using multi-step proposal distribution for improved MCMC convergence in Bayesian network structure learning. EURASIP journal on bioinformatics & systems biology 2015 (2015)
Pietro H Guzzi, Maria Teresa Di Martino, Pierosandro Tagliaferri, Pierfrancesco Tassone, Mario Cannataro
Analysis of miRNA, mRNA, and TF interactions through network-based methods. EURASIP journal on bioinformatics & systems biology 2015 (2015)
Fazle E Faisal, Lei Meng, Joseph Crawford, Tijana Milenković
The post-genomic era of biological network alignment. EURASIP journal on bioinformatics & systems biology 2015 (2015)
Marzieh Ayati, Sinan Erten, Mark R Chance, Mehmet Koyutürk
MOBAS: identification of disease-associated protein subnetworks using modularity-based scoring. EURASIP journal on bioinformatics & systems biology 2015 (2015)

volume 2014, number 1, 2014

Mohammadmahdi R Yousefi, Edward R Dougherty
A comparison study of optimal and suboptimal intervention policies for gene regulatory networks in the presence of uncertainty. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)
Jehandad Khan, Nidhal Bouaynaya, Hassan M Fathallah-Shaykh
Tracking of time-varying genomic regulatory networks with a LASSO-Kalman smoother. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)
Brian R King, Maurice Aburdene, Alex Thompson, Zach Warres
Application of discrete Fourier inter-coefficient difference for assessing genetic sequence similarity. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)
Genyuan Li, Herschel Rabitz
Analysis of gene network robustness based on saturated fixed point attractors. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)
Hongjia Ouyang, Jie Fang, Liangzhong Shen, Edward R Dougherty, Wenbin Liu
Learning restricted Boolean network model by time-series data. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)
Alexandros Iliadis, Dimitris Anastassiou, Xiaodong Wang
A sequential Monte Carlo framework for haplotype inference in CNV/SNP genotype data. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)
Bin Jia, Xiaodong Wang
Regularized EM algorithm for sparse parameter estimation in nonlinear dynamic systems with application to gene regulatory network inference. EURASIP journal on bioinformatics & systems biology 2014 (1) (2014)