Adam J Hockenberry

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 14

Top Topics

Saccharomyces Cerevisiae

Quality Control

Gene Expression

Community Acquired Pneumonia

Top Venues

Breast cancer research and treatment

JCO precision oncology

This page only lists publications with an associated author ORCID identifier.

Publications

Melody A Cobleigh, Kayla Viets Layng, Elizabeth Mauer, Brett Mahon, Adam J Hockenberry, Abde M Abukhdeir
Comparative genomic analysis of PIK3R1-mutated and wild-type breast cancers. Breast cancer research and treatment 204 (2) (2023)
Melody A Cobleigh, Kayla Viets Layng, Elizabeth Mauer, Brett Mahon, Adam J Hockenberry, Abde M Abukhdeir
Comparative genomic analysis of PIK3R1-mutated and wild-type breast cancers. Breast cancer research and treatment (2023)
Elle C Moore, Gerard C Blobe, Nicholas C DeVito, Brent A Hanks, Michael R Harrison, Christopher J Hoimes, Jingquan Jia, Michael A Morse, Parvathy Jayaprakasan, Andrew MacKelfresh, Hillary Mulder, Adam J Hockenberry, Alia Zander, Martin C Stumpe, Jackson Michuda, Kyle A Beauchamp, Eric Perakslis, Timothy Taxter, Daniel J George
Assessing the utility of molecular diagnostic classification for cancers of unknown primary. Cancer medicine (2023)
Mackenzie M Johnson, Adam J Hockenberry, Matthew J McGuffie, Luiz Carlos Vieira, Claus O Wilke
Growth-dependent gene expression variation influences the strength of codon usage biases. bioRxiv : the preprint server for biology (2023)
Melody A Cobleigh, Kayla Viets Layng, Elizabeth Mauer, Brett Mahon, Adam J Hockenberry, Abde M Abukhdeir
Comparative genomic analysis of PIK3R1-mutated and wild-type breast cancers. Breast cancer research and treatment 204 (2) (2023)
Kabir Mody, Prerna Jain, Sherif M El-Refai, Nilofer S Azad, Daniel J Zabransky, Nilofer S Azad, Rachna T Shroff, Robin Kate Kelley, Anthony B El-Khoueiry, Adam J Hockenberry, Denise Lau, Gregory B Lesinski, Mark Yarchoan
Clinical, Genomic, and Transcriptomic Data Profiling of Biliary Tract Cancer Reveals Subtype-Specific Immune Signatures. JCO precision oncology 6 (2022)
Sahil B Shah, Alexis M Hill, Claus O Wilke, Adam J Hockenberry
Generating dynamic gene expression patterns without the need for regulatory circuits. PloS one 17 (5) (2022)
Irina Laczkovich, Kyle Mangano, Xinhao Shao, Adam J Hockenberry, Yu Gao, Alexander Mankin, Nora Vázquez-Laslop, Michael J Federle
Discovery of Unannotated Small Open Reading Frames in Streptococcus pneumoniae D39 Involved in Quorum Sensing and Virulence Using Ribosome Profiling. mBio 13 (4) (2022)
Adam J Hockenberry, Claus O Wilke
Evolutionary couplings detect side-chain interactions. PeerJ 7 (2019)
Sophia S Liu, Adam J Hockenberry, Michael C Jewett, Luís A Nunes Amaral
A novel framework for evaluating the performance of codon usage bias metrics. Journal of the Royal Society, Interface 15 (138) (2019)
Nikolay A Aleksashin, Margus Leppik, Adam J Hockenberry, Dorota Klepacki, Nora Vazquez-Laslop, Michael C Jewett, Jaanus Remme, Alexander S Mankin
Assembly and functionality of the ribosome with tethered subunits. Nature communications 10 (1) (2019)
Adam J Hockenberry, Claus O Wilke
Phylogenetic weighting does little to improve the accuracy of evolutionary coupling analyses. Entropy (Basel, Switzerland) 21 (10) (2019)
M Umut Caglar, Adam J Hockenberry, Claus O Wilke
Predicting bacterial growth conditions from mRNA and protein abundances. PloS one 13 (11) (2018)
Adam J Hockenberry, Adam R Pah, Michael C Jewett, Luís A Nunes Amaral
Leveraging genome-wide datasets to quantify the functional role of the anti-Shine-Dalgarno sequence in regulating translation efficiency. Open biology 7 (1) (2017)