Alena Khmelinskaia

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 9

Top Topics

Molecular Dynamics Simulations

Single Molecule

Protein Protein

Top Venues

bioRxiv : the preprint server for biology

PLoS computational biology

Nature communications

Journal of the American Chemical Society

This page only lists publications with an associated author ORCID identifier.

Publications

Alena Khmelinskaia, Neville P Bethel, Farzad Fatehi, Aleksandar Antanasijevic, Andrew J Borst, Szu-Hsueh Lai, Jing Yang John Wang, Bhoomika Basu Mallik, Marcos C Miranda, Andrew M Watkins, Cassandra Ogohara, Shane Caldwell, Mengyu Wu, Albert J R Heck, David Veesler, Andrew B Ward, David Baker, Reidun Twarock, Neil P King
Local structural flexibility drives oligomorphism in computationally designed protein assemblies. bioRxiv : the preprint server for biology (2023)
Erin C Yang, Robby Divine, Marcos C Miranda, Andrew J Borst, William Sheffler, Jason Z Zhang, Justin Decarreau, Amijai Saragovi, Mohamad H Abedi, Nicolas Goldbach, Maggie Ahlrichs, Craig Dobbins, Alexis Hand, Suna Cheng, Mila Lamb, Paul M Levine, Sidney Chan, Rebecca Skotheim, Jorge Fallas, George Ueda, Joshua M Lubner, Masaharu Somiya, Alena Khmelinskaia, Neil P King, Julien S Baker
Computational design of non-porous, pH-responsive antibody nanoparticles. bioRxiv : the preprint server for biology (2023)
William Sheffler, Erin C Yang, Quinton Dowling, Yang Hsia, Chelsea N Fries, Jenna Stanislaw, Mark D Langowski, Marisa Brandys, Zhe Li, Rebecca Skotheim, Andrew J Borst, Alena Khmelinskaia, Neil P King, Julien S Baker
Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock. PLoS computational biology 19 (5) (2023)
Erin C Yang, Robby Divine, Marcos C Miranda, Andrew J Borst, William Sheffler, Jason Z Zhang, Justin Decarreau, Amijai Saragovi, Mohamad H Abedi, Nicolas Goldbach, Maggie Ahlrichs, Craig Dobbins, Alexis Hand, Suna Cheng, Mila Lamb, Paul M Levine, Sidney Chan, Rebecca Skotheim, Jorge Fallas, George Ueda, Joshua M Lubner, Masaharu Somiya, Alena Khmelinskaia, Neil P King, Julien S Baker
Computational design of non-porous, pH-responsive antibody nanoparticles. bioRxiv : the preprint server for biology (2023)
Hiromune Eto, Naoki Soga, Henri G Franquelim, Philipp Glock, Alena Khmelinskaia, Lei Kai, Michael Heymann, Hiroyuki Noji, Petra Schwille
Design of Sealable Custom-Shaped Cell Mimicries Based on Self-Assembled Monolayers on CYTOP Polymer. ACS applied materials & interfaces 11 (24) (2019)
Susanne Kempter, Alena Khmelinskaia, Maximilian T Strauss, Petra Schwille, Ralf Jungmann, Tim Liedl, Wooli Bae
Single Particle Tracking and Super-Resolution Imaging of Membrane-Assisted Stop-and-Go Diffusion and Lattice Assembly of DNA Origami. ACS nano 13 (2) (2019)
Alena Khmelinskaia, Jonas Mücksch, Eugene P Petrov, Henri G Franquelim, Petra Schwille
Control of Membrane Binding and Diffusion of Cholesteryl-Modified DNA Origami Nanostructures by DNA Spacers. Langmuir : the ACS journal of surfaces and colloids 34 (49) (2018)
Weixiang Ye, Sirin Celiksoy, Arpad Jakab, Alena Khmelinskaia, Tamara Heermann, Ana Raso, Seraphine Valeska Wegner, Germán Rivas, Petra Schwille, Rubén Ahijado-Guzmán, Carsten Sönnichsen
Plasmonic Nanosensors Reveal a Height Dependence of MinDE Protein Oscillations on Membrane Features. Journal of the American Chemical Society 140 (51) (2018)
Henri G Franquelim, Alena Khmelinskaia, Jean-Philippe Sobczak, Hendrik Dietz, Petra Schwille
Membrane sculpting by curved DNA origami scaffolds. Nature communications 9 (1) (2018)