Alex C Keene

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 34

Top Topics

Drosophila Melanogaster

Genome Wide Association Study

Top Venues

Science advances

Journal of experimental zoology. Part B, Molecular and developmental evolution

The Journal of experimental biology

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Rachel L Moran, Emilie J Richards, Claudia Patricia Ornelas-García, Joshua B Gross, Alexandra Donny, Jonathan Wiese, Alex C Keene, Johanna E Kowalko, Nicolas Rohner, Suzanne E McGaugh
Selection-driven trait loss in independently evolved cavefish populations. Nature communications 14 (1) (2023)
Justin Palermo, Alessandra Chesi, Amber J Zimmerman, Shilpa Sonti, Matthew C Pahl, Chiara Lasconi, Elizabeth B Brown, James A Pippin, Andrew D Wells, Fusun Doldur-Balli, Diego R Mazzotti, Allan I Pack, Phillip R Gehrman, Struan F A Grant, Alex C Keene
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep. Science advances 9 (1) (2023)
Evan Lloyd, Aakriti Rastogi, Niah Holtz, Ben Aaronson, R Craig Albertson, Alex C Keene
Ontogeny and social context regulate the circadian activity patterns of Lake Malawi cichlids. Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology (2023)
Rachel L Moran, Emilie J Richards, Claudia Patricia Ornelas-García, Joshua B Gross, Alexandra Donny, Jonathan Wiese, Alex C Keene, Johanna E Kowalko, Nicolas Rohner, Suzanne E McGaugh
Selection-driven trait loss in independently evolved cavefish populations. Nature communications 14 (1) (2023)
Justin Palermo, Alessandra Chesi, Amber J Zimmerman, Shilpa Sonti, Matthew C Pahl, Chiara Lasconi, Elizabeth B Brown, James A Pippin, Andrew D Wells, Fusun Doldur-Balli, Diego R Mazzotti, Allan I Pack, Phillip R Gehrman, Struan F A Grant, Alex C Keene
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep. Science advances 9 (1) (2023)
Justin Palermo, Alessandra Chesi, Amber J Zimmerman, Shilpa Sonti, Matthew C Pahl, Chiara Lasconi, Elizabeth B Brown, James A Pippin, Andrew D Wells, Fusun Doldur-Balli, Diego R Mazzotti, Allan I Pack, Phillip R Gehrman, Struan F A Grant, Alex C Keene
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep. Science advances 9 (1) (2023)
Rachel L Moran, Emilie J Richards, Claudia Patricia Ornelas-García, Joshua B Gross, Alexandra Donny, Jonathan Wiese, Alex C Keene, Johanna E Kowalko, Nicolas Rohner, Suzanne E McGaugh
Selection-driven trait loss in independently evolved cavefish populations. Nature communications 14 (1) (2023)
Justin Palermo, Alessandra Chesi, Amber J Zimmerman, Shilpa Sonti, Matthew C Pahl, Chiara Lasconi, Elizabeth B Brown, James A Pippin, Andrew D Wells, Fusun Doldur-Balli, Diego R Mazzotti, Allan I Pack, Phillip R Gehrman, Struan F A Grant, Alex C Keene
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep. Science advances 9 (1) (2023)
Justin Palermo, Alessandra Chesi, Amber J Zimmerman, Shilpa Sonti, Matthew C Pahl, Chiara Lasconi, Elizabeth B Brown, James A Pippin, Andrew D Wells, Fusun Doldur-Balli, Diego R Mazzotti, Allan I Pack, Phillip R Gehrman, Struan F A Grant, Alex C Keene
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep. Science advances 9 (1) (2023)
Justin Palermo, Alessandra Chesi, Amber J Zimmerman, Shilpa Sonti, Matthew C Pahl, Chiara Lasconi, Elizabeth B Brown, James A Pippin, Andrew D Wells, Fusun Doldur-Balli, Diego R Mazzotti, Allan I Pack, Phillip R Gehrman, Struan F A Grant, Alex C Keene
Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep. Science advances 9 (1) (2023)
Rachel L Moran, Emilie J Richards, Claudia Patricia Ornelas-García, Joshua B Gross, Alexandra Donny, Jonathan Wiese, Alex C Keene, Johanna E Kowalko, Nicolas Rohner, Suzanne E McGaugh
Selection-driven trait loss in independently evolved cavefish populations. Nature communications 14 (1) (2023)
Kazuma Murakami, Justin Palermo, Bethany A Stanhope, Allen G Gibbs, Alex C Keene
A screen for sleep and starvation resistance identifies a wake-promoting role for the auxiliary channel unc79. G3 (Bethesda, Md.) 11 (8) (2022)
Camila Oliva, Nicole K Hinz, Wayne Robinson, Alexys M Barrett Thompson, Julianna Booth, Lina M Crisostomo, Samantha Zanineli, Maureen Tanner, Evan Lloyd, Morgan O'Gorman, Brittnee McDole, Alexandra Paz, Rob Kozol, Elizabeth B Brown, Johanna E Kowalko, Yaouen Fily, Erik R Duboue, Alex C Keene
Characterizing the genetic basis of trait evolution in the Mexican cavefish. Evolution & development 24 (5) (2022)
Annabel Perry, Suzanne E McGaugh, Alex C Keene, Heath Blackmon
CaveCrawler: an interactive analysis suite for cavefish bioinformatics. G3 (Bethesda, Md.) 12 (8) (2022)
Katya L Mack, James B Jaggard, Jenna L Persons, Emma Y Roback, Courtney N Passow, Bethany A Stanhope, Estephany Ferrufino, Dai Tsuchiya, Sarah E Smith, Brian D Slaughter, Johanna E Kowalko, Nicolas Rohner, Alex C Keene, Suzanne E McGaugh
Repeated evolution of circadian clock dysregulation in cavefish populations. PLoS genetics 17 (7) (2021)
Evan Lloyd, Brian Chhouk, Andrew J Conith, Alex C Keene, R Craig Albertson
Diversity in rest-activity patterns among Lake Malawi cichlid fishes suggests a novel axis of habitat partitioning. The Journal of experimental biology 224 (7) (2021)
Elizabeth B Brown, Kreesha D Shah, Justin Palermo, Manali Dey, Anupama Dahanukar, Alex C Keene
Ir56d-dependent fatty acid responses in Drosophila uncover taste discrimination between different classes of fatty acids. eLife 10 (2021)
Itzel Sifuentes-Romero, Estephany Ferrufino, Sunishka Thakur, Lauren A Laboissonniere, Michael Solomon, Courtney L Smith, Alex C Keene, Jeffrey M Trimarchi, Johanna E Kowalko
Repeated evolution of eye loss in Mexican cavefish: Evidence of similar developmental mechanisms in independently evolved populations. Journal of experimental zoology. Part B, Molecular and developmental evolution 334 (7-8) (2020)
Estelle L S Pamboro, Elizabeth B Brown, Alex C Keene
Dietary fatty acids promote sleep through a taste-independent mechanism. Genes, brain, and behavior 19 (4) (2020)
Suzanne E McGaugh, Johanna E Kowalko, Erik R Duboue, Peter Lewis, Tamara Anne Franz-Odendaal, Nicolas Rohner, Joshua B Gross, Alex C Keene
Dark world rises: The emergence of cavefish as a model for the study of evolution, development, behavior, and disease. Journal of experimental zoology. Part B, Molecular and developmental evolution 334 (7-8) (2020)
Suzanne E McGaugh, Courtney N Passow, James Brian Jaggard, Bethany A Stahl, Alex C Keene
Unique transcriptional signatures of sleep loss across independently evolved cavefish populations. Journal of experimental zoology. Part B, Molecular and developmental evolution 334 (7-8) (2020)
Alexandra Paz, Brittnee McDole, Johanna E Kowalko, Erik R Duboue, Alex C Keene
Evolution of the acoustic startle response of Mexican cavefish. Journal of experimental zoology. Part B, Molecular and developmental evolution 334 (7-8) (2020)
Jacqueline S R Chin, Cody L Loomis, Lydia T Albert, Shirley Medina-Trenche, Johanna Kowalko, Alex C Keene, Erik R Duboue
Analysis of stress responses in Astyanax larvae reveals heterogeneity among different populations. Journal of experimental zoology. Part B, Molecular and developmental evolution 334 (7-8) (2020)
Elizabeth B Brown, Kreesha D Shah, Richard Faville, Benjamin Kottler, Alex C Keene
Drosophila insulin-like peptide 2 mediates dietary regulation of sleep intensity. PLoS genetics 16 (3) (2020)
James B Jaggard, Evan Lloyd, Anders Yuiska, Adam Patch, Yaouen Fily, Johanna E Kowalko, Lior Appelbaum, Erik R Duboue, Alex C Keene
Cavefish brain atlases reveal functional and anatomical convergence across independently evolved populations. Science advances 6 (38) (2020)
Elizabeth B Brown, Melissa E Slocumb, Milan Szuperak, Arianna Kerbs, Allen G Gibbs, Matthew S Kayser, Alex C Keene
Starvation resistance is associated with developmentally specified changes in sleep, feeding and metabolic rate. The Journal of experimental biology 222 (Pt 3) (2019)
Maria E Yurgel, Priyanka Kakad, Meet Zandawala, Dick R Nässel, Tanja A Godenschwege, Alex C Keene
A single pair of leucokinin neurons are modulated by feeding state and regulate sleep-metabolism interactions. PLoS biology 17 (2) (2019)
Maria E Yurgel, Kreesha D Shah, Elizabeth B Brown, Carter Burns, Ryan A Bennick, Justin R DiAngelo, Alex C Keene
Ade2 Functions in the Drosophila Fat Body To Promote Sleep. G3 (Bethesda, Md.) 8 (11) (2018)
Elizabeth B Brown, Joshua Torres, Ryan A Bennick, Valerie Rozzo, Arianna Kerbs, Justin R DiAngelo, Alex C Keene
Variation in sleep and metabolic function is associated with latitude and average temperature in Drosophila melanogaster. Ecology and evolution 8 (8) (2018)
Alex C Keene, Erik R Duboue
The origins and evolution of sleep. The Journal of experimental biology 221 (Pt 11) (2018)
James B Jaggard, Bethany A Stahl, Evan Lloyd, David A Prober, Erik R Duboue, Alex C Keene
Hypocretin underlies the evolution of sleep loss in the Mexican cavefish. eLife 7 (2018)
Bethany A Stahl, Alex C Keene
To rebound or not to rebound. eLife 6 (2017)
James Jaggard, Beatriz G Robinson, Bethany A Stahl, Ian Oh, Pavel Masek, Masato Yoshizawa, Alex C Keene
The lateral line confers evolutionarily derived sleep loss in the Mexican cavefish. The Journal of experimental biology 220 (Pt 2) (2017)
John M Tauber, Elizabeth B Brown, Yuanyuan Li, Maria E Yurgel, Pavel Masek, Alex C Keene
A subset of sweet-sensing neurons identified by IR56d are necessary and sufficient for fatty acid taste. PLoS genetics 13 (11) (2017)