G3 (Bethesda, Md.)

Keyphrases

Publications

volume 14, number 8, 2024

Caroline S Muirhead, Kirthi C Reddy, Sophia Guerra, Michael Rieger, Michael P Hart, Jagan Srinivasan, Sreekanth H Chalasani
Neurexin drives Caenorhabditis elegans avoidance behavior independently of its post-synaptic binding partner neuroligin. G3 (Bethesda, Md.) 14 (8) (2024)
David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
Marco Antônio Amorim Peixoto, Igor Ferreira Coelho, Kristen A Leach, Thomas Lübberstedt, Leonardo Lopes Bhering, Marcio Fernando Ribeiro de Resende Júnior
Use of simulation to optimize a sweet corn breeding program: implementing genomic selection and doubled haploid technology. G3 (Bethesda, Md.) 14 (8) (2024)
Ruhi Patel, Astra S Bryant, Michelle L Castelletto, Breanna Walsh, Damia Akimori, Elissa A Hallem
The generation of stable transgenic lines in the human-infective nematode Strongyloides stercoralis. G3 (Bethesda, Md.) 14 (8) (2024)
Tong Gong, Robert Karlsson, Shuyang Yao, Patrik K E Magnusson, Olesya Ajnakina, Andrew Steptoe, Laxmi Bhatta, Ben Brumpton, Ashish Kumar, Erik Mélen, null null, Keng-Han Lin, Chao Tian, Tove Fall, Catarina Almqvist
The genetic architecture of dog ownership: large-scale genome-wide association study in 97,552 European-ancestry individuals. G3 (Bethesda, Md.) 14 (8) (2024)
Jose A Montero-Tena, Nayyer Abdollahi Sisi, Tobias Kox, Amine Abbadi, Rod J Snowdon, Agnieszka A Golicz
haploMAGIC: accurate phasing and detection of recombination in multiparental populations despite genotyping errors. G3 (Bethesda, Md.) 14 (8) (2024)
Matthew A Campbell, Matthew C Hale
Genomic structural variation in Barramundi Perch Lates calcarifer and potential roles in speciation and adaptation. G3 (Bethesda, Md.) 14 (8) (2024)
Jakob M Heinz, Jennifer Lu, Lindsay K Huebner, Steven L Salzberg, Markus Sommer, Stephanie M Rosales
Novel metagenomics analysis of stony coral tissue loss disease. G3 (Bethesda, Md.) 14 (8) (2024)
Ruhi Patel, Astra S Bryant, Michelle L Castelletto, Breanna Walsh, Damia Akimori, Elissa A Hallem
The generation of stable transgenic lines in the human-infective nematode Strongyloides stercoralis. G3 (Bethesda, Md.) 14 (8) (2024)
Earl A Middlebrook, Robab Katani, Jeanne M Fair
OrthoPhyl-streamlining large-scale, orthology-based phylogenomic studies of bacteria at broad evolutionary scales. G3 (Bethesda, Md.) 14 (8) (2024)
Kouhei Toga, Takuma Sakamoto, Miyuki Kanda, Keita Tamura, Keisuke Okuhara, Hiroko Tabunoki, Hidemasa Bono
Long-read genome assembly of the Japanese parasitic wasp Copidosoma floridanum (Hymenoptera: Encyrtidae). G3 (Bethesda, Md.) 14 (8) (2024)
Gavin C Woodruff, John H Willis, Erik Johnson, Patrick C Phillips
Widespread changes in gene expression accompany body size evolution in nematodes. G3 (Bethesda, Md.) 14 (8) (2024)
Muhammad A Haseeb, Alana C Bernys, Erin E Dickert, Sharon E Bickel
An RNAi screen to identify proteins required for cohesion rejuvenation during meiotic prophase in Drosophila oocytes. G3 (Bethesda, Md.) 14 (8) (2024)
Tong Gong, Robert Karlsson, Shuyang Yao, Patrik K E Magnusson, Olesya Ajnakina, Andrew Steptoe, Laxmi Bhatta, Ben Brumpton, Ashish Kumar, Erik Mélen, null null, Keng-Han Lin, Chao Tian, Tove Fall, Catarina Almqvist
The genetic architecture of dog ownership: large-scale genome-wide association study in 97,552 European-ancestry individuals. G3 (Bethesda, Md.) 14 (8) (2024)
Anushka Sarkar, Emily R Hildebrandt, Khushi V Patel, Emily T Mai, Sumil A Shah, June H Kim, Walter K Schmidt
Comprehensive analysis of CXXX sequence space reveals that Saccharomyces cerevisiae GGTase-I mainly relies on a2X substrate determinants. G3 (Bethesda, Md.) 14 (8) (2024)
Taein Kim, Jeong Hun Lee, Hyo Hyun Seo, Sang Hyun Moh, Sung Soo Choi, Jun Kim, Sang-Gyu Kim
Genome assembly of Hibiscus sabdariffa L. provides insights into metabolisms of medicinal natural products. G3 (Bethesda, Md.) 14 (8) (2024)
Julien Roche, Ronan Griot, François Allal, Mathieu Besson, Pierrick Haffray, Pierre Patrice, Florence Phocas, Marc Vandeputte
APIS: an updated parentage assignment software managing triploids induced from diploid parents. G3 (Bethesda, Md.) 14 (8) (2024)
Aiman Farheen, Nicola T Case, Jessie MacAlpine, Ci Fu, Nicole Robbins, Leah E Cowen
The putative prenyltransferase Nus1 is required for filamentation in the human fungal pathogen Candida albicans. G3 (Bethesda, Md.) 14 (8) (2024)
Jaime Andrés Osorio-Guarin, Janet Higgins, Deisy Lisseth Toloza-Moreno, Federica Di Palma, Ayda Lilia Enriquez Valencia, Fernando Riveros Munévar, José J De Vega, Roxana Yockteng
Genome-wide association analyses using multilocus models on bananas (Musa spp.) reveal candidate genes related to morphology, fruit quality, and yield. G3 (Bethesda, Md.) 14 (8) (2024)
Anushka Sarkar, Emily R Hildebrandt, Khushi V Patel, Emily T Mai, Sumil A Shah, June H Kim, Walter K Schmidt
Comprehensive analysis of CXXX sequence space reveals that Saccharomyces cerevisiae GGTase-I mainly relies on a2X substrate determinants. G3 (Bethesda, Md.) 14 (8) (2024)
Kouhei Toga, Takuma Sakamoto, Miyuki Kanda, Keita Tamura, Keisuke Okuhara, Hiroko Tabunoki, Hidemasa Bono
Long-read genome assembly of the Japanese parasitic wasp Copidosoma floridanum (Hymenoptera: Encyrtidae). G3 (Bethesda, Md.) 14 (8) (2024)
Youngbeom Cho, Jae-Yoon Kim, Seon-Kyu Kim, Seon-Young Kim, Namshin Kim, Jinhyuk Lee, Jong-Lyul Park
Whole-genome sequencing analysis of soybean diversity across different countries and selection signature of Korean soybean accession. G3 (Bethesda, Md.) 14 (8) (2024)
Dandan Wang, Pasi Rastas, Xueling Yi, Ari Löytynoja, Mikko Kivikoski, Xueyun Feng, Kerry Reid, Juha Merilä
Improved assembly of the Pungitius pungitius reference genome. G3 (Bethesda, Md.) 14 (8) (2024)
Caroline S Muirhead, Kirthi C Reddy, Sophia Guerra, Michael Rieger, Michael P Hart, Jagan Srinivasan, Sreekanth H Chalasani
Neurexin drives Caenorhabditis elegans avoidance behavior independently of its post-synaptic binding partner neuroligin. G3 (Bethesda, Md.) 14 (8) (2024)
Nicole M Wanner, Lauren Hughes, Jacob Cassens, Maya Enriquez, Samrawit Gebeyehu, Mohammed Alshagawi, Jason Hatfield, Anna Kauffman, Baylor Brown, Caitlin Klaeui, Islam F Mabrouk, Carrie Walls, Taylor Yeater, Anne Rivas, Christopher D Faulk
The genome of Przewalski's horse (Equus ferus przewalskii). G3 (Bethesda, Md.) 14 (8) (2024)
Cory A Dottor, Christine L Iosue, Anita M Loshnowsky, Rachael A Hopkins, Peyton L Stauffer, Julia M Ugras, Jack C Spagnuola, Daniel A Kraut, Dennis D Wykoff
Regulation of thiamine and pyruvate decarboxylase genes by Pdc2 in Nakaseomyces glabratus (Candida glabrata) is complex. G3 (Bethesda, Md.) 14 (8) (2024)
Wesley C Warren, Edward S Rice, Margaret E Lazzeroni, Emma Roback, Alex Keene, Fergal J Martin, Denye Ogeh, Leanne Haggerty, Rachel A Carroll, Suzanne E McGaugh, Nicolas Rohner
Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery. G3 (Bethesda, Md.) 14 (8) (2024)
David C Molik, Amanda R Stahlke, Sharu Paul Sharma, Tyler J Simmonds, Renee L Corpuz, Angela N Kauwe, Jeremy E Schrader, Charles J Mason, Sheina B Sim, Scott M Geib
otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. G3 (Bethesda, Md.) 14 (8) (2024)
Susan L McEvoy, Rachel Sarah Meyer, Kristen E Hasenstab-Lehman, C Matt Guilliams
The reference genome of an endangered Asteraceae, Deinandra increscens subsp. villosa, endemic to the Central Coast of California. G3 (Bethesda, Md.) 14 (8) (2024)
Dandan Wang, Pasi Rastas, Xueling Yi, Ari Löytynoja, Mikko Kivikoski, Xueyun Feng, Kerry Reid, Juha Merilä
Improved assembly of the Pungitius pungitius reference genome. G3 (Bethesda, Md.) 14 (8) (2024)
Youngbeom Cho, Jae-Yoon Kim, Seon-Kyu Kim, Seon-Young Kim, Namshin Kim, Jinhyuk Lee, Jong-Lyul Park
Whole-genome sequencing analysis of soybean diversity across different countries and selection signature of Korean soybean accession. G3 (Bethesda, Md.) 14 (8) (2024)
Earl A Middlebrook, Robab Katani, Jeanne M Fair
OrthoPhyl-streamlining large-scale, orthology-based phylogenomic studies of bacteria at broad evolutionary scales. G3 (Bethesda, Md.) 14 (8) (2024)
Nicole M Wanner, Lauren Hughes, Jacob Cassens, Maya Enriquez, Samrawit Gebeyehu, Mohammed Alshagawi, Jason Hatfield, Anna Kauffman, Baylor Brown, Caitlin Klaeui, Islam F Mabrouk, Carrie Walls, Taylor Yeater, Anne Rivas, Christopher D Faulk
The genome of Przewalski's horse (Equus ferus przewalskii). G3 (Bethesda, Md.) 14 (8) (2024)
Maria Ivanova, Eric G Moss
A temporal sequence of heterochronic gene activities promotes stage-specific developmental events in Caenorhabditis elegans. G3 (Bethesda, Md.) 14 (8) (2024)
Joseph M DeTemple, Daniel H Chitwood, Veronica Mosquera, Clinton J Whipple
QTL analysis of divergent floral morphology traits between Gilia yorkii and G. capitata. G3 (Bethesda, Md.) 14 (8) (2024)
Wesley C Warren, Edward S Rice, Margaret E Lazzeroni, Emma Roback, Alex Keene, Fergal J Martin, Denye Ogeh, Leanne Haggerty, Rachel A Carroll, Suzanne E McGaugh, Nicolas Rohner
Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery. G3 (Bethesda, Md.) 14 (8) (2024)
Tim Regan, Tiago S Hori, Tim P Bean
A chromosome-scale Mytilus edulis genome assembly for aquaculture, marine ecology, and evolution. G3 (Bethesda, Md.) 14 (8) (2024)
Gavin C Woodruff, John H Willis, Erik Johnson, Patrick C Phillips
Widespread changes in gene expression accompany body size evolution in nematodes. G3 (Bethesda, Md.) 14 (8) (2024)
Tsunemi Yamashita, Douglas D Rhoads, Jeff Pummill
A robust genome assembly with transcriptomic data from the striped bark scorpion, Centruroides vittatus. G3 (Bethesda, Md.) 14 (8) (2024)
Martina Albuja-Quintana, Gabriela Pozo, Milton Gordillo-Romero, Carolina E Armijos, Maria de Lourdes Torres
Genome report: First reference genome of Vaccinium floribundum Kunth, an emblematic Andean species. G3 (Bethesda, Md.) 14 (8) (2024)
Maria Ivanova, Eric G Moss
A temporal sequence of heterochronic gene activities promotes stage-specific developmental events in Caenorhabditis elegans. G3 (Bethesda, Md.) 14 (8) (2024)
Marco Antônio Amorim Peixoto, Igor Ferreira Coelho, Kristen A Leach, Thomas Lübberstedt, Leonardo Lopes Bhering, Marcio Fernando Ribeiro de Resende Júnior
Use of simulation to optimize a sweet corn breeding program: implementing genomic selection and doubled haploid technology. G3 (Bethesda, Md.) 14 (8) (2024)
Susan L McEvoy, Rachel Sarah Meyer, Kristen E Hasenstab-Lehman, C Matt Guilliams
The reference genome of an endangered Asteraceae, Deinandra increscens subsp. villosa, endemic to the Central Coast of California. G3 (Bethesda, Md.) 14 (8) (2024)
Muhammad A Haseeb, Alana C Bernys, Erin E Dickert, Sharon E Bickel
An RNAi screen to identify proteins required for cohesion rejuvenation during meiotic prophase in Drosophila oocytes. G3 (Bethesda, Md.) 14 (8) (2024)
Tsunemi Yamashita, Douglas D Rhoads, Jeff Pummill
A robust genome assembly with transcriptomic data from the striped bark scorpion, Centruroides vittatus. G3 (Bethesda, Md.) 14 (8) (2024)
Aiman Farheen, Nicola T Case, Jessie MacAlpine, Ci Fu, Nicole Robbins, Leah E Cowen
The putative prenyltransferase Nus1 is required for filamentation in the human fungal pathogen Candida albicans. G3 (Bethesda, Md.) 14 (8) (2024)
Cory A Dottor, Christine L Iosue, Anita M Loshnowsky, Rachael A Hopkins, Peyton L Stauffer, Julia M Ugras, Jack C Spagnuola, Daniel A Kraut, Dennis D Wykoff
Regulation of thiamine and pyruvate decarboxylase genes by Pdc2 in Nakaseomyces glabratus (Candida glabrata) is complex. G3 (Bethesda, Md.) 14 (8) (2024)
Jose A Montero-Tena, Nayyer Abdollahi Sisi, Tobias Kox, Amine Abbadi, Rod J Snowdon, Agnieszka A Golicz
haploMAGIC: accurate phasing and detection of recombination in multiparental populations despite genotyping errors. G3 (Bethesda, Md.) 14 (8) (2024)
Jaime Andrés Osorio-Guarin, Janet Higgins, Deisy Lisseth Toloza-Moreno, Federica Di Palma, Ayda Lilia Enriquez Valencia, Fernando Riveros Munévar, José J De Vega, Roxana Yockteng
Genome-wide association analyses using multilocus models on bananas (Musa spp.) reveal candidate genes related to morphology, fruit quality, and yield. G3 (Bethesda, Md.) 14 (8) (2024)
Joseph M DeTemple, Daniel H Chitwood, Veronica Mosquera, Clinton J Whipple
QTL analysis of divergent floral morphology traits between Gilia yorkii and G. capitata. G3 (Bethesda, Md.) 14 (8) (2024)