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Alex Dickson (A Dickson)

ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 13

Top Venues

Journal of computer-aided molecular design

Journal of computational chemistry

Journal of chemical theory and computation

Journal of the American Chemical Society

Michigan State University

University of Chicago (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Michigan State University Aug 1o 2015

United States

Assistant Professor :: Biochemistry & Molecular Biology

Education History

University of Chicago Sep 1o 2006 - Aug 10o 2011

United States

PHD :: Chemistry

Publications

Samik Bose, Samuel D Lotz, Indrajit Deb, Megan Shuck, Kin Sing Stephen Lee, Alex Dickson
How Robust Is the Ligand Binding Transition State? Journal of the American Chemical Society (2023)
Nazanin Donyapour, Fatemeh Fathi Niazi, Nicole M Roussey, Samik Bose, Alex Dickson
Flexible Topology: A Dynamic Model of a Continuous Chemical Space. Journal of chemical theory and computation (2023)
Tom Dixon, Derek MacPherson, Barmak Mostofian, Taras Dauzhenka, Samuel D Lotz, Dwight McGee, Sharon Shechter, Utsab R Shrestha, Rafal Wiewiora, Zachary A McDargh, Fen Pei, Rajat Pal, João V Ribeiro, Tanner Wilkerson, Vipin Sachdeva, Ning Gao, Shourya Jain, Samuel Sparks, Yunxing Li, Alexander Vinitsky, Xin Zhang, Asghar M Razavi, István Kolossváry, Jason Imbriglio, Artem Evdokimov, Louise Bergeron, Wenchang Zhou, Jagat Adhikari, Benjamin Ruprecht, Alex Dickson, Huafeng Xu, Woody Sherman, Jesus A Izaguirre
Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry. Nature communications 13 (1) (2022)
Nicole M Roussey, Alex Dickson
Quality over quantity: Sampling high probability rare events with the weighted ensemble algorithm. Journal of computational chemistry (2022)
Nicole M Roussey, Alex Dickson
Quality over quantity: Sampling high probability rare events with the weighted ensemble algorithm. Journal of computational chemistry 44 (8) (2022)
Nazanin Donyapour, Matthew J Hirn, Alex Dickson
ClassicalGSG: Prediction of log P using classical molecular force fields and geometric scattering for graphs. Journal of computational chemistry 42 (14) (2021)
Arzu Uyar, Alex Dickson
Perturbation of ACE2 Structural Ensembles by SARS-CoV-2 Spike Protein Binding. Journal of chemical theory and computation 17 (9) (2021)
Nazanin Donyapour, Alex Dickson
Predicting partition coefficients for the SAMPL7 physical property challenge using the ClassicalGSG method. Journal of computer-aided molecular design 35 (7) (2021)
Andrea Rizzi, Travis Jensen, David R Slochower, Matteo Aldeghi, Vytautas Gapsys, Dimitris Ntekoumes, Stefano Bosisio, Michail Papadourakis, Niel M Henriksen, Bert L de Groot, Zoe Cournia, Alex Dickson, Julien Michel, Michael K Gilson, Michael R Shirts, David L Mobley, John D Chodera
The SAMPL6 SAMPLing challenge: assessing the reliability and efficiency of binding free energy calculations. Journal of computer-aided molecular design 34 (5) (2020)
Nicole M Roussey, Alex Dickson
Enhanced Jarzynski free energy calculations using weighted ensemble. The Journal of chemical physics 153 (13) (2020)
Samuel D Lotz, Alex Dickson
Unbiased Molecular Dynamics of 11 min Timescale Drug Unbinding Reveals Transition State Stabilizing Interactions. Journal of the American Chemical Society 140 (2) (2018)
Tom Dixon, Samuel D Lotz, Alex Dickson
Predicting ligand binding affinity using on- and off-rates for the SAMPL6 SAMPLing challenge. Journal of computer-aided molecular design 32 (10) (2018)
A Uyar, V T Karamyan, Alex Dickson
Long-Range Changes in Neurolysin Dynamics Upon Inhibitor Binding. Journal of chemical theory and computation 14 (1) (2017)

Alex Dickson.css-eqlu8i{font-size:small;padding-left:4px;} (A Dickson)

Publication Activity (10 Years)

Top Topics

Top Venues

Alex Dickson (A Dickson)