Alexander Viloria Winnett (Alexander Winnett)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 21

Top Topics

Gene Expression

High Throughput Sequencing

Top Venues

bioRxiv : the preprint server for biology

Open forum infectious diseases

Infection control and hospital epidemiology

Journal of clinical microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Alexander Viloria Winnett, Timothy Stenzel, Rustem F Ismagilov
Validating combination throat-nasal swabs for COVID-19 tests would improve early detection, especially for the most vulnerable. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America (2024)
Alexander Viloria Winnett, Reid Akana, Natasha Shelby, Hannah Davich, Saharai Caldera, Taikun Yamada, John Raymond B Reyna, Anna E Romano, Alyssa M Carter, Mi Kyung Kim, Matt Thomson, Colten Tognazzini, Matthew Feaster, Ying-Ying Goh, Yap Ching Chew, Rustem F Ismagilov
Extreme differences in SARS-CoV-2 viral loads among respiratory specimen types during presumed pre-infectious and infectious periods. PNAS nexus 2 (3) (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Alexander Viloria Winnett, Reid Akana, Natasha Shelby, Hannah Davich, Saharai Caldera, Taikun Yamada, John Raymond B Reyna, Anna E Romano, Alyssa M Carter, Mi Kyung Kim, Matt Thomson, Colten Tognazzini, Matthew Feaster, Ying-Ying Goh, Yap Ching Chew, Rustem F Ismagilov
Extreme differences in SARS-CoV-2 viral loads among respiratory specimen types during presumed pre-infectious and infectious periods. PNAS nexus 2 (3) (2023)
Alyssa M Carter, Alexander Viloria Winnett, Anna E Romano, Reid Akana, Natasha Shelby, Rustem F Ismagilov
Laboratory Evaluation Links Some False-Positive COVID-19 Antigen Test Results Observed in a Field Study to a Specific Lot of Test Strips. Open forum infectious diseases 10 (1) (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Alyssa M Carter, Alexander Viloria Winnett, Anna E Romano, Reid Akana, Natasha Shelby, Rustem F Ismagilov
Laboratory Evaluation Links Some False-Positive COVID-19 Antigen Test Results Observed in a Field Study to a Specific Lot of Test Strips. Open forum infectious diseases 10 (1) (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Alexander Viloria Winnett, Michael K Porter, Anna E Romano, Emily S Savela, Reid Akana, Natasha Shelby, Jessica A Reyes, Noah W Schlenker, Matthew M Cooper, Alyssa M Carter, Jenny Ji, Jacob T Barlow, Colten Tognazzini, Matthew Feaster, Ying-Ying Goh, Rustem F Ismagilov
Morning SARS-CoV-2 Testing Yields Better Detection of Infection Due to Higher Viral Loads in Saliva and Nasal Swabs upon Waking. Microbiology spectrum (2022)
Emily S Savela, Alexander Viloria Winnett, Anna E Romano, Michael K Porter, Natasha Shelby, Reid Akana, Jenny Ji, Matthew M Cooper, Noah W Schlenker, Jessica A Reyes, Alyssa M Carter, Jacob T Barlow, Colten Tognazzini, Matthew Feaster, Ying-Ying Goh, Rustem F Ismagilov
Quantitative SARS-CoV-2 Viral-Load Curves in Paired Saliva Samples and Nasal Swabs Inform Appropriate Respiratory Sampling Site and Analytical Test Sensitivity Required for Earliest Viral Detection. Journal of clinical microbiology 60 (2) (2021)
Alexander Viloria Winnett, Vinay Srinivasan, Matthew Davis, Tara Vijayan, Daniel Z Uslan, Omai B Garner, Annabelle de St Maurice
The Path of More Resistance: A Comparison of NHSN and CLSI Criteria in Developing Cumulative Antimicrobial Susceptibility Test Reports and Institutional Antibiograms. Journal of clinical microbiology (2021)
Alexander Viloria Winnett, Matthew M Cooper, Natasha Shelby, Anna E Romano, Jessica A Reyes, Jenny Ji, Michael K Porter, Emily S Savela, Jacob T Barlow, Reid Akana, Colten Tognazzini, Matthew Feaster, Ying-Ying Goh, Rustem F Ismagilov
SARS-CoV-2 Viral Load in Saliva Rises Gradually and to Moderate Levels in Some Humans. medRxiv : the preprint server for health sciences (2020)
Nathan G Schoepp, Eric J Liaw, Alexander Viloria Winnett, Emily S Savela, Omai B Garner, Rustem F Ismagilov
Differential DNA accessibility to polymerase enables 30-minute phenotypic β-lactam antibiotic susceptibility testing of carbapenem-resistant Enterobacteriaceae. PLoS biology 18 (3) (2020)
Alexander Viloria Winnett, Lauren P Jatt, Linda Sohn, Marcia Lysaght, Thomas Yoshikawa, Steven R Simon, Christopher J Graber, Matthew Bidwell Goetz
Coordinated outreach for veterans in long-term care facilities by an integrated Veterans Affairs healthcare system during the COVID-19 pandemic. Infection control and hospital epidemiology 42 (6) (2020)
Lauren P Jatt, Alexander Viloria Winnett, Christopher J Graber, John Vallone, David O Beenhouwer, Matthew Bidwell Goetz
Widespread severe acute respiratory coronavirus virus 2 (SARS-CoV-2) laboratory surveillance program to minimize asymptomatic transmission in high-risk inpatient and congregate living settings. Infection control and hospital epidemiology 41 (11) (2020)