Delaney K Sullivan

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 32

Top Venues

bioRxiv : the preprint server for biology

Nature communications

Bioinformatics (Oxford, England)

Oncogene

Stanford University (MSC)

This page only lists publications with an associated author ORCID identifier.

Education History

Stanford University

United States

MSC :: Computer Science

Stanford University

United States

BSC :: Biology

Publications

Anja Deutzmann, Delaney K Sullivan, Renumathy Dhanasekaran, Wei Li, Xinyu Chen, Ling Tong, Wadie D Mahauad-Fernandez, John Bell, Adriane Mosley, Angela N Koehler, Yulin Li, Dean W Felsher
Nuclear to cytoplasmic transport is a druggable dependency in MYC-driven hepatocellular carcinoma. Nature communications 15 (1) (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Delaney K Sullivan, Lior Pachter
Flexible parsing, interpretation, and editing of technical sequences with splitcode. Bioinformatics (Oxford, England) 40 (6) (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Rebekah Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Narges Rezaie, Heidi Yahan Liang, Ghassan Filimban, Shimako Kawauchi, Conrad G Oakes, Diane Trout, Brian A Williams, Grant R MacGregor, Barbara J Wold, Ali Mortazavi, Lior Pachter
Long-read sequencing transcriptome quantification with lr-kallisto. bioRxiv : the preprint server for biology (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Anja Deutzmann, Delaney K Sullivan, Renumathy Dhanasekaran, Wei Li, Xinyu Chen, Ling Tong, Wadie D Mahauad-Fernandez, John Bell, Adriane Mosley, Angela N Koehler, Yulin Li, Dean W Felsher
Nuclear to cytoplasmic transport is a druggable dependency in MYC-driven hepatocellular carcinoma. Nature communications 15 (1) (2024)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals putative novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2024)
Joseph Matthew Rich, Lambda Moses, Pétur Helgi Einarsson, Kayla C Jackson, Laura Luebbert, Ali Sina Booeshaghi, Sindri Antonsson, Delaney K Sullivan, Nicolas L Bray, Páll Melsted, Lior Pachter
The impact of package selection and versioning on single-cell RNA-seq analysis. bioRxiv : the preprint server for biology (2024)
Anja Deutzmann, Delaney K Sullivan, Renumathy Dhanasekaran, Wei Li, Xinyu Chen, Ling Tong, Wadie D Mahauad-Fernandez, John Bell, Adriane Mosley, Angela N Koehler, Yulin Li, Dean W Felsher
Nuclear to cytoplasmic transport is a druggable dependency in MYC-driven hepatocellular carcinoma. Nature communications 15 (1) (2024)
Delaney K Sullivan, Lior Pachter
Flexible parsing, interpretation, and editing of technical sequences with splitcode. Bioinformatics (Oxford, England) 40 (6) (2024)
Joseph Matthew Rich, Lambda Moses, Pétur Helgi Einarsson, Kayla C Jackson, Laura Luebbert, Ali Sina Booeshaghi, Sindri Antonsson, Delaney K Sullivan, Nicolas L Bray, Páll Melsted, Lior Pachter
The impact of package selection and versioning on single-cell RNA-seq analysis. bioRxiv : the preprint server for biology (2024)
Rebekah Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Narges Rezaie, Heidi Yahan Liang, Ghassan Filimban, Shimako Kawauchi, Conrad G Oakes, Diane Trout, Brian A Williams, Grant R MacGregor, Barbara J Wold, Ali Mortazavi, Lior Pachter
Long-read sequencing transcriptome quantification with lr-kallisto. bioRxiv : the preprint server for biology (2024)
Rebekah Loving, Delaney K Sullivan, Fairlie Reese, Elisabeth Rebboah, Jasmine Sakr, Narges Rezaie, Heidi Yahan Liang, Ghassan Filimban, Shimako Kawauchi, Conrad G Oakes, Diane Trout, Brian A Williams, Grant R MacGregor, Barbara J Wold, Ali Mortazavi, Lior Pachter
Long-read sequencing transcriptome quantification with lr-kallisto. bioRxiv : the preprint server for biology (2024)
Anja Deutzmann, Delaney K Sullivan, Renumathy Dhanasekaran, Wei Li, Xinyu Chen, Ling Tong, Wadie D Mahauad-Fernandez, John Bell, Adriane Mosley, Angela N Koehler, Yulin Li, Dean W Felsher
Nuclear to cytoplasmic transport is a druggable dependency in MYC-driven hepatocellular carcinoma. Nature communications 15 (1) (2024)
Delaney K Sullivan, Lior Pachter
Flexible parsing, interpretation, and editing of technical sequences with splitcode. Bioinformatics (Oxford, England) 40 (6) (2024)
Delaney K Sullivan, Lior Pachter
Flexible parsing, interpretation, and editing of technical sequences with splitcode. Bioinformatics (Oxford, England) 40 (6) (2024)
Joseph Matthew Rich, Lambda Moses, Pétur Helgi Einarsson, Kayla C Jackson, Laura Luebbert, Ali Sina Booeshaghi, Sindri Antonsson, Delaney K Sullivan, Nicolas L Bray, Páll Melsted, Lior Pachter
The impact of package selection and versioning on single-cell RNA-seq analysis. bioRxiv : the preprint server for biology (2024)
Anja Deutzmann, Delaney K Sullivan, Renumathy Dhanasekaran, Wei Li, Xinyu Chen, Ling Tong, Wadie D Mahauad-Fernandez, John Bell, Adriane Mosley, Angela N Koehler, Yulin Li, Dean W Felsher
Nuclear to cytoplasmic transport is a druggable dependency in MYC-driven hepatocellular carcinoma. Nature communications 15 (1) (2024)
Delaney K Sullivan, Lior Pachter
Flexible parsing and preprocessing of technical sequences with splitcode. bioRxiv : the preprint server for biology (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Delaney K Sullivan, Lior Pachter
Flexible parsing and preprocessing of technical sequences with splitcode. bioRxiv : the preprint server for biology (2023)
Delaney K Sullivan, Lior Pachter
Flexible parsing and preprocessing of technical sequences with splitcode. bioRxiv : the preprint server for biology (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Delaney K Sullivan, Kyung Hoi Joseph Min, Kristján Eldjárn Hjörleifsson, Laura Luebbert, Guillaume Holley, Lambda Moses, Johan Gustafsson, Nicolas L Bray, Harold Pimentel, Ali Sina Booeshaghi, Páll Melsted, Lior Pachter
kallisto, bustools, and kb-python for quantifying bulk, single-cell, and single-nucleus RNA-seq. bioRxiv : the preprint server for biology (2023)
Laura Luebbert, Delaney K Sullivan, Maria Carilli, Kristján Eldjárn Hjörleifsson, Alexander Viloria Winnett, Tara Chari, Lior Pachter
Efficient and accurate detection of viral sequences at single-cell resolution reveals novel viruses perturbing host gene expression. bioRxiv : the preprint server for biology (2023)
Delaney K Sullivan, Anja Deutzmann, Josiah Yarbrough, Maya S Krishnan, Arvin M Gouw, David I Bellovin, Stacey J Adam, Daniel F Liefwalker, Renumathy Dhanasekaran, Dean W Felsher
MYC oncogene elicits tumorigenesis associated with embryonic, ribosomal biogenesis, and tissue-lineage dedifferentiation gene expression changes. Oncogene 41 (45) (2022)
Yuanhui Liu, Nancy G Azizian, Delaney K Sullivan, Yulin Li
mTOR inhibition attenuates chemosensitivity through the induction of chemotherapy resistant persisters. Nature communications 13 (1) (2022)
Nancy G Azizian, Delaney K Sullivan, Litong Nie, Sammy Pardo, Dana Molleur, Junjie Chen, Susan T Weintraub, Yulin Li
Selective Labeling and Identification of the Tumor Cell Proteome of Pancreatic Cancer In Vivo. Journal of proteome research 20 (1) (2020)
Jonathan Xin Wang, Delaney K Sullivan, Alex C Wells, Jonathan H Chen
ClinicNet: machine learning for personalized clinical order set recommendations. JAMIA open 3 (2) (2020)

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Publication Activity (10 Years)

Top Topics

Top Venues

Delaney K Sullivan