Amanda D Clark

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 42

Top Topics

Mild Cognitive Impairment

Gene Expression

Subarachnoid Hemorrhage

Quality Control

Top Venues

bioRxiv : the preprint server for biology

BMC pharmacology & toxicology

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Tabea M Soelter, Timothy C Howton, Elizabeth J Wilk, Jordan H Whitlock, Amanda D Clark, Allison Birnbaum, Dalton C Patterson, Constanza J Cortes, Brittany N Lasseigne
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points. bioRxiv : the preprint server for biology (2024)
Emma F Jones, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Brittany N Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage. bioRxiv : the preprint server for biology (2024)
Jennifer L Fisher, Elizabeth J Wilk, Vishal H Oza, Sam E Gary, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Anita B Hjelmeland, Brittany N Lasseigne
Signature reversion of three disease-associated gene signatures prioritizes cancer drug repurposing candidates. FEBS open bio 14 (5) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Emma F Jones, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Brittany N Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage. bioRxiv : the preprint server for biology (2024)
Tabea M Soelter, Timothy C Howton, Elizabeth J Wilk, Jordan H Whitlock, Amanda D Clark, Allison Birnbaum, Dalton C Patterson, Constanza J Cortes, Brittany N Lasseigne
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points. bioRxiv : the preprint server for biology (2024)
Jennifer L Fisher, Elizabeth J Wilk, Vishal H Oza, Sam E Gary, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Anita B Hjelmeland, Brittany N Lasseigne
Signature reversion of three disease-associated gene signatures prioritizes cancer drug repurposing candidates. FEBS open bio (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Jennifer L Fisher, Elizabeth J Wilk, Vishal H Oza, Sam E Gary, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Anita B Hjelmeland, Brittany N Lasseigne
Signature reversion of three disease-associated gene signatures prioritizes cancer drug repurposing candidates. FEBS open bio 14 (5) (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Tabea M Soelter, Timothy C Howton, Elizabeth J Wilk, Jordan H Whitlock, Amanda D Clark, Allison Birnbaum, Dalton C Patterson, Constanza J Cortes, Brittany N Lasseigne
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points. bioRxiv : the preprint server for biology (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Jennifer L Fisher, Elizabeth J Wilk, Vishal H Oza, Sam E Gary, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Anita B Hjelmeland, Brittany N Lasseigne
Signature reversion of three disease-associated gene signatures prioritizes cancer drug repurposing candidates. FEBS open bio 14 (5) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. PloS one 19 (1) (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Tabea M Soelter, Timothy C Howton, Elizabeth J Wilk, Jordan H Whitlock, Amanda D Clark, Allison Birnbaum, Dalton C Patterson, Constanza J Cortes, Brittany N Lasseigne
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points. bioRxiv : the preprint server for biology (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Emma F Jones, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Brittany N Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage. bioRxiv : the preprint server for biology (2024)
Tabea M Soelter, Timothy C Howton, Elizabeth J Wilk, Jordan H Whitlock, Amanda D Clark, Allison Birnbaum, Dalton C Patterson, Constanza J Cortes, Brittany N Lasseigne
Evaluation of altered cell-cell communication between glia and neurons in the hippocampus of 3xTg-AD mice at two time points. bioRxiv : the preprint server for biology (2024)
Emma F Jones, Timothy C Howton, Victoria L Flanary, Amanda D Clark, Brittany N Lasseigne
Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage. bioRxiv : the preprint server for biology (2024)
Jennifer L Fisher, Amanda D Clark, Emma F Jones, Brittany N Lasseigne
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes. BMC pharmacology & toxicology 25 (1) (2024)
Jordan H Whitlock, Elizabeth J Wilk, Timothy C Howton, Amanda D Clark, Brittany N Lasseigne
The landscape of SETBP1 gene expression and transcription factor activity across human tissues. bioRxiv : the preprint server for biology (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. Bioinformatics (Oxford, England) 39 (12) (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. Bioinformatics (Oxford, England) 39 (12) (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. bioRxiv : the preprint server for biology (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. bioRxiv : the preprint server for biology (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. bioRxiv : the preprint server for biology (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. Bioinformatics (Oxford, England) 39 (12) (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. bioRxiv : the preprint server for biology (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. Bioinformatics (Oxford, England) 39 (12) (2023)
Anisha Haldar, Vishal H Oza, Nathaniel S DeVoss, Amanda D Clark, Brittany N Lasseigne
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis. Bioinformatics (Oxford, England) 39 (12) (2023)
Tabea M Soelter, Timothy C Howton, Amanda D Clark, Vishal H Oza, Brittany N Lasseigne
Altered Glia-Neuron Communication in Alzheimer's Disease Affects WNT, p53, and NFkB Signaling Determined by snRNA-seq. bioRxiv : the preprint server for biology (2023)
Amanda D Clark, Bailey K Howell, Alan E Wilson, Tonia S Schwartz
Draft genomes for one Microcystis-resistant and one Microcystis-sensitive strain of the water flea, Daphnia pulicaria. G3 (Bethesda, Md.) 11 (11) (2022)
Aundrea K Westfall, Rory S Telemeco, Mariana B Grizante, Damien S Waits, Amanda D Clark, Dasia Y Simpson, Randy L Klabacka, Alexis P Sullivan, George H Perry, Michael W Sears, Christian L Cox, Robert M Cox, Matthew E Gifford, Henry B John-Alder, Tracy Langkilde, Michael J Angilletta, Adam D Leaché, Marc Tollis, Kenro Kusumi, Tonia S Schwartz
A chromosome-level genome assembly for the eastern fence lizard (Sceloporus undulatus), a reptile model for physiological and evolutionary ecology. GigaScience 10 (10) (2022)