Amy K Barczak

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 27

Top Topics

Machine Learning

Mycobacterium Tuberculosis

Top Venues

Science translational medicine

Nature communications

Proceedings of the National Academy of Sciences of the United States of America

Annals of the American Thoracic Society

This page only lists publications with an associated author ORCID identifier.

Publications

Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Sara C Auld, Ajay Sheshadri, Jennifer Alexander-Brett, Yael Aschner, Amy K Barczak, Maria C Basal, Keira A Cohen, Charles Dela Cruz, Claire F McGroder, Marcos I Restrepo, Karen M Ridge, Lynn M Schnapp, Katrina E Traber, Richard G Wunderink, David Zhang, Assem G Ziady, Engi F Attia, Jane Carter, James D Chalmers, Kristina Crothers, Charles Feldman, Barbara E Jones, Naftali Kaminski, Joseph Keane, David M Lewinsohn, Mark L Metersky, Joseph P Mizgerd, Alison Morris, Julio A Ramirez, Amali E Samarasinghe, Bashar S Staitieh, Cari Stek, Jie Sun, Scott E Evans
Postinfectious Pulmonary Complications: Establishing Research Priorities to Advance the Field: An Official American Thoracic Society Workshop Report. Annals of the American Thoracic Society 21 (9) (2024)
Babatunde Ogunlade, Loza F Tadesse, Hongquan Li, Nhat Vu, Niaz Banaei, Amy K Barczak, Amr A E Saleh, Manu Prakash, Jennifer A Dionne
Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy. Proceedings of the National Academy of Sciences of the United States of America 121 (25) (2024)
Babatunde Ogunlade, Loza F Tadesse, Hongquan Li, Nhat Vu, Niaz Banaei, Amy K Barczak, Amr A E Saleh, Manu Prakash, Jennifer A Dionne
Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy. Proceedings of the National Academy of Sciences of the United States of America 121 (25) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Babatunde Ogunlade, Loza F Tadesse, Hongquan Li, Nhat Vu, Niaz Banaei, Amy K Barczak, Amr A E Saleh, Manu Prakash, Jennifer A Dionne
Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy. Proceedings of the National Academy of Sciences of the United States of America 121 (25) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Babatunde Ogunlade, Loza F Tadesse, Hongquan Li, Nhat Vu, Niaz Banaei, Amy K Barczak, Amr A E Saleh, Manu Prakash, Jennifer A Dionne
Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy. Proceedings of the National Academy of Sciences of the United States of America 121 (25) (2024)
Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Sara C Auld, Ajay Sheshadri, Jennifer Alexander-Brett, Yael Aschner, Amy K Barczak, Maria C Basal, Keira A Cohen, Charles Dela Cruz, Claire F McGroder, Marcos I Restrepo, Karen M Ridge, Lynn M Schnapp, Katrina E Traber, Richard G Wunderink, David Zhang, Assem G Ziady, Engi F Attia, Jane Carter, James D Chalmers, Kristina Crothers, Charles Feldman, Barbara E Jones, Naftali Kaminski, Joseph Keane, David M Lewinsohn, Mark L Metersky, Joseph P Mizgerd, Alison Morris, Julio A Ramirez, Amali E Samarasinghe, Bashar S Staitieh, Cari Stek, Jie Sun, Scott E Evans
Postinfectious Pulmonary Complications: Establishing Research Priorities to Advance the Field: An Official American Thoracic Society Workshop Report. Annals of the American Thoracic Society 21 (9) (2024)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynolds, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary Scott Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 viral clearance and evolution varies by type and severity of immunodeficiency. Science translational medicine 16 (731) (2024)
Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Eike-Christian Wamhoff, Larance Ronsard, Jared Feldman, Grant A Knappe, Blake M Hauser, Anna Romanov, James Brett Case, Shilpa Sanapala, Evan C Lam, Kerri J St Denis, Julie Boucau, Amy K Barczak, Alejandro B Balazs, Michael S. Diamond, Aaron G Schmidt, Daniel Lingwood, Mark Bathe
Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds. Nature communications 15 (1) (2024)
Gregory E Edelstein, Julie Boucau, Rockib Uddin, Caitlin Marino, May Y Liew, Mamadou Barry, Manish Chandra Choudhary, Rebecca F Gilbert, Zahra Reynolds, Yijia Li, Dessie Tien, Shruti Sagar, Tammy D Vyas, Yumeko Kawano, Jeffrey A Sparks, Sarah P Hammond, Zachary Scott Wallace, Jatin M Vyas, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li, Mark J Siedner
SARS-CoV-2 Virologic Rebound With Nirmatrelvir-Ritonavir Therapy : An Observational Study. Annals of internal medicine (2023)
Ryan P McNamara, Jenny S Maron, Julie Boucau, Vicky Roy, Nicholas E Webb, Harry L Bertera, Amy K Barczak, The Positives Study Staff, Nicholas Franko, Jennifer K Logue, Megan Kemp, Jonathan Z Li, Ling Zhou, Ching-Lin Hsieh, Jason S Mclellan, Mark J Siedner, Michael S Seaman, Jacob E Lemieux, Helen Y Chu, Galit Alter
Anamnestic humoral correlates of immunity across SARS-CoV-2 variants of concern. mBio (2023)
Yijia Li, Manish Chandra Choudhary, James Regan, Julie Boucau, Anusha Nathan, Tessa Speidel, May Yee Liew, Gregory E Edelstein, Yumeko Kawano, Rockib Uddin, Rinki Deo, Caitlin Marino, Matthew A Getz, Zahra Reynold, Mamadou Barry, Rebecca F Gilbert, Dessie Tien, Shruti Sagar, Tammy D Vyas, James P Flynn, Sarah P Hammond, Lewis A Novack, Bina Choi, Manuela Cernadas, Zachary S Wallace, Jeffrey A Sparks, Jatin M Vyas, Michael S Seaman, Gaurav D Gaiha, Mark J Siedner, Amy K Barczak, Jacob E Lemieux, Jonathan Z Li
SARS-CoV-2 Viral Clearance and Evolution Varies by Extent of Immunodeficiency. medRxiv : the preprint server for health sciences (2023)
Charul Jani, Sydney L Solomon, Joshua M Peters, Stephanie C Pringle, Amelia E Hinman, Julie Boucau, Bryan D Bryson, Amy K Barczak
TLR2 is non-redundant in the population and subpopulation responses to Mycobacterium tuberculosis in macrophages and in vivo . mSystems (2023)
Julie Boucau, Rockib Uddin, Caitlin Marino, James Regan, James P Flynn, Manish C Choudhary, Geoffrey Chen, Ashley M Stuckwisch, Josh Mathews, May Y Liew, Arshdeep Singh, Zahra Reynolds, Surabhi L Iyer, Grace C Chamberlin, Tammy D Vyas, Jatin M Vyas, Sarah E Turbett, Jonathan Z Li, Jacob E Lemieux, Amy K Barczak, Mark J Siedner
Characterization of virologic rebound following nirmatrelvir-ritonavir treatment for COVID-19. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America (2022)
Amelia E Hinman, Charul Jani, Stephanie C Pringle, Wei R Zhang, Neharika Jain, Amanda J Martinot, Amy K Barczak
Mycobacterium tuberculosis canonical virulence factors interfere with a late component of the TLR2 response. eLife 10 (2021)
Jacob E Lazarus, John A Branda, Ronak G Gandhi, Miriam B Barshak, Kimon C Zachary, Amy K Barczak
Disseminated Intravascular Infection Caused by Paecilomyces variotii: Case Report and Review of the Literature. Open forum infectious diseases 7 (6) (2020)