Apratim Mitra

Publication Activity (10 Years)

Years Active: 2021-2023
Publications (10 Years): 12

Top Topics

Neural Stem Cells

Transcription Factor

Top Venues

Nature genetics

Nature communications

Science advances

The Journal of experimental medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics 55 (2) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics 55 (2) (2023)
Jeremie Oliver Piña, Resmi Raju, Daniela Marta Roth, Emma Wentworth Winchester, Parna Chattaraj, Fahad Kidwai, Fabio Rueda Faucz, James Iben, Apratim Mitra, Kiersten Campbell, Gus Fridell, Caroline Esnault, Justin L Cotney, Ryan K Dale, Rena N D'Souza
Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis. Nature communications 14 (1) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics 55 (2) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics (2023)
Christopher T Rhodes, Joyce J Thompson, Apratim Mitra, Dhanya Asokumar, Dongjin R Lee, Daniel J Lee, Yajun Zhang, Eva Jason, Ryan K Dale, Pedro P Rocha, Timothy J Petros
An epigenome atlas of neural progenitors within the embryonic mouse forebrain. Nature communications 13 (1) (2022)
Connor M Kean, Christopher J Tracy, Apratim Mitra, Beenish Rahat, Matthew T Van Winkle, Claudia M Gebert, Jacob A Noeker, Anne L Calof, Arthur D Lander, Judith A Kassis, Karl Pfeifer
Decreasing Wapl dosage partially corrects embryonic growth and brain transcriptome phenotypes in Nipbl +/- embryos. Science advances 8 (48) (2022)
Joyce J Thompson, Daniel J Lee, Apratim Mitra, Sarah Frail, Ryan K Dale, Pedro P Rocha
Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages. Nature communications 13 (1) (2022)
Daniel B Stamos, Lauren M Clubb, Apratim Mitra, Laura B Chopp, Jia Nie, Yi Ding, Arundhoti Das, Harini Venkataganesh, Jan Lee, Dalal El-Khoury, LiQi Li, Avinash Bhandoola, Remy Bosselut, Paul E Love
The histone demethylase Lsd1 regulates multiple repressive gene programs during T cell development. The Journal of experimental medicine 218 (12) (2021)
David B Beck, Mohammed A Basar, Anthony J Asmar, Joyce J Thompson, Hirotsugu Oda, Daniela T Uehara, Ken Saida, Sander Pajusalu, Inga Talvik, Precilla D'Souza, Joann Norma Bodurtha, Weiyi Mu, Kristin W Barañano, Noriko Miyake, Raymond Yu-Jeang Wang, Marlies Kempers, Tomoko Tamada, Yutaka Nishimura, Satoshi Okada, Tomoki Kosho, Ryan Dale, Apratim Mitra, Ellen F Macnamara, null null, Naomichi Matsumoto, Johji Inazawa, Magdalena Walkiewicz, Katrin Õunap, Cynthia J Tifft, Ivona Aksentijevich, Daniel L Kastner, Pedro P Rocha, Achim Werner
Linkage-specific deubiquitylation by OTUD5 defines an embryonic pathway intolerant to genomic variation. Science advances 7 (4) (2021)