Jennifer A Mitchell (Jennifer Mitchell)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 32

Top Topics

Transcription Factor

Embryonic Stem Cells

Top Venues

Nature genetics

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Andrew G Duncan, Jennifer A Mitchell, Alan M Moses
Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation. Bioinformatics (Oxford, England) 40 (4) (2024)
Nawrah Khader, Virlana M Shchuka, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
SOX4 exerts contrasting regulatory effects on labor-associated gene promoters in myometrial cells. PloS one 19 (4) (2024)
Nawrah Khader, Virlana M Shchuka, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
SOX4 exerts contrasting regulatory effects on labor-associated gene promoters in myometrial cells. PloS one 19 (4) (2024)
Andrew G Duncan, Jennifer A Mitchell, Alan M Moses
Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation. Bioinformatics (Oxford, England) 40 (4) (2024)
Nawrah Khader, Virlana M Shchuka, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
SOX4 exerts contrasting regulatory effects on labor-associated gene promoters in myometrial cells. PloS one 19 (4) (2024)
Nawrah Khader, Virlana M Shchuka, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
SOX4 exerts contrasting regulatory effects on labor-associated gene promoters in myometrial cells. PloS one 19 (4) (2024)
Nawrah Khader, Virlana M Shchuka, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
SOX4 exerts contrasting regulatory effects on labor-associated gene promoters in myometrial cells. PloS one 19 (4) (2024)
Virlana M Shchuka, Nawrah Khader, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
MYB and ELF3 differentially modulate labor-inducing gene expression in myometrial cells. PloS one 18 (1) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics 55 (2) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics (2023)
Virlana M Shchuka, Nawrah Khader, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
MYB and ELF3 differentially modulate labor-inducing gene expression in myometrial cells. PloS one 18 (1) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics 55 (2) (2023)
Virlana M Shchuka, Nawrah Khader, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
MYB and ELF3 differentially modulate labor-inducing gene expression in myometrial cells. PloS one 18 (1) (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics (2023)
Tom Sexton, Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit de Kort, Karen Meaburn, Tiegh Taylor, Virlana Shchuka, Silvia Kocanova, Guilherme Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. Research square (2023)
Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit Ac de Kort, Karen Meaburn, Tiegh Taylor, Virlana M Shchuka, Silvia Kocanova, Guilherme Monteiro Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky, Tom Sexton
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. bioRxiv : the preprint server for biology (2023)
Virlana M Shchuka, Nawrah Khader, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
MYB and ELF3 differentially modulate labor-inducing gene expression in myometrial cells. PloS one 18 (1) (2023)
Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit Ac de Kort, Karen Meaburn, Tiegh Taylor, Virlana M Shchuka, Silvia Kocanova, Guilherme Monteiro Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky, Tom Sexton
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. bioRxiv : the preprint server for biology (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics 55 (2) (2023)
Virlana M Shchuka, Nawrah Khader, Anna Dorogin, Oksana Shynlova, Jennifer A Mitchell
MYB and ELF3 differentially modulate labor-inducing gene expression in myometrial cells. PloS one 18 (1) (2023)
Luis E Abatti, Patricia Lado-Fernández, Linh Huynh, Manuel Collado, Michael M Hoffman, Jennifer A Mitchell
Epigenetic reprogramming of a distal developmental enhancer cluster drives SOX2 overexpression in breast and lung adenocarcinoma. Nucleic acids research (2023)
Shreeta Chakraborty, Nina Kopitchinski, Zhenyu Zuo, Ariel Eraso, Parirokh Awasthi, Raj Chari, Apratim Mitra, Ian C Tobias, Sakthi D Moorthy, Ryan K Dale, Jennifer A Mitchell, Timothy J Petros, Pedro P Rocha
Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nature genetics (2023)
Angeliki Platania, Cathie Erb, Mariano Barbieri, Bastien Molcrette, Erwan Grandgirard, Marit Ac de Kort, Karen Meaburn, Tiegh Taylor, Virlana M Shchuka, Silvia Kocanova, Guilherme Monteiro Oliveira, Jennifer A Mitchell, Evi Soutoglou, Tineke L Lenstra, Nacho Molina, Argyris Papantonis, Kerstin Bystricky, Tom Sexton
Competition between transcription and loop extrusion modulates promoter and enhancer dynamics. bioRxiv : the preprint server for biology (2023)
Gurdeep Singh, Gilda Stefanelli, Klotilda Narkaj, Mark A Brimble, Samantha D Creighton, Timothy A B McLean, Meaghan Hall, Krista A Mitchnick, Jacqueline Zakaria, Thanh Phung, Anas Reda, Amanda M Leonetti, Ashley Monks, Lara Ianov, Boyer D Winters, Brandon J Walters, Andrew M Davidoff, Jennifer A Mitchell, Iva B Zovkic
Histone macroH2A1 is a stronger regulator of hippocampal transcription and memory than macroH2A2 in mice. Communications biology 5 (1) (2022)
Patrick Morley Willoughby, Molly Allen, Jessica Yu, Roman Korytnikov, Tianhui Chen, Yupeng Liu, Isis So, Haoyu Wan, Neil Macpherson, Jennifer A Mitchell, Rodrigo Fernandez-Gonzalez, Ashley E E Bruce
Correction: The recycling endosome protein Rab25 coordinates collective cell movements in the zebrafish surface epithelium. eLife 11 (2022)
Gurdeep Singh, Gilda Stefanelli, Klotilda Narkaj, Mark A Brimble, Samantha D Creighton, Timothy A B McLean, Meaghan Hall, Krista A Mitchnick, Jacqueline Zakaria, Thanh Phung, Anas Reda, Amanda M Leonetti, Ashley Monks, Lara Ianov, Boyer D Winters, Brandon J Walters, Andrew M Davidoff, Jennifer A Mitchell, Iva B Zovkic
Author Correction: Histone macroH2A1 is a stronger regulator of hippocampal transcription and memory than macroH2A2 in mice. Communications biology 5 (1) (2022)
Tiegh Taylor, Natalia Sikorska, Virlana M Shchuka, Sanjay Chahar, Chenfan Ji, Neil N Macpherson, Sakthi D Moorthy, Marit A C de Kort, Shanelle Mullany, Nawrah Khader, Zoe E Gillespie, Lida Langroudi, Ian C Tobias, Tineke L Lenstra, Jennifer A Mitchell, Tom Sexton
Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus. Genes & development 36 (11-12) (2022)
Gurdeep Singh, Shanelle Mullany, Sakthi D Moorthy, Richard Zhang, Tahmid Mehdi, Ruxiao Tian, Andrew G Duncan, Alan M Moses, Jennifer A Mitchell
A flexible repertoire of transcription factor binding sites and a diversity threshold determines enhancer activity in embryonic stem cells. Genome research 31 (4) (2021)
Patrick Morley Willoughby, Molly Allen, Jessica Yu, Roman Korytnikov, Tianhui Chen, Yupeng Liu, Isis So, Neil Macpherson, Jennifer A Mitchell, Rodrigo Fernandez-Gonzalez, Ashley E E Bruce
The recycling endosome protein Rab25 coordinates collective cell movements in the zebrafish surface epithelium. eLife 10 (2021)
Nawrah Khader, Virlana M Shchuka, Oksana Shynlova, Jennifer A Mitchell
Transcriptional control of parturition: insights from gene regulation studies in the myometrium. Molecular human reproduction 27 (5) (2021)
Gerd A Blobel, Douglas R Higgs, Jennifer A Mitchell, Dimple Notani, Richard A Young
Testing the super-enhancer concept. Nature reviews. Genetics 22 (12) (2021)
Virlana M Shchuka, Luis E Abatti, Huayun Hou, Nawrah Khader, Anna Dorogin, Michael D Wilson, Oksana Shynlova, Jennifer A Mitchell
The pregnant myometrium is epigenetically activated at contractility-driving gene loci prior to the onset of labor in mice. PLoS biology 18 (7) (2020)