Cedric Chauve

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 9

Top Topics

Single Molecule

High Throughput Sequencing

Top Venues

Bioinformatics (Oxford, England)

Journal of mathematical biology

Cytometry. Part A : the journal of the International Society for Analytical Cytology

This page only lists publications with an associated author ORCID identifier.

Publications

Fatih Karaoğlanoğlu, Baraa Orabi, Ryan K Flannigan, Cedric Chauve, Faraz Hach
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator. Bioinformatics (Oxford, England) 40 (2) (2024)
Fatih Karaoğlanoğlu, Baraa Orabi, Ryan K Flannigan, Cedric Chauve, Faraz Hach
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator. Bioinformatics (Oxford, England) 40 (2) (2024)
Fatih Karaoğlanoğlu, Baraa Orabi, Ryan K Flannigan, Cedric Chauve, Faraz Hach
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator. Bioinformatics (Oxford, England) 40 (2) (2024)
Fatih Karaoğlanoğlu, Baraa Orabi, Ryan K Flannigan, Cedric Chauve, Faraz Hach
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator. Bioinformatics (Oxford, England) 40 (2) (2024)
Aniket Mane, Mahsa Faizrahnemoon, Tomáš Vinař, Broňa Brejová, Cedric Chauve
PlasBin-flow: a flow-based MILP algorithm for plasmid contigs binning. Bioinformatics (Oxford, England) 39 (39 Suppl 1) (2023)
Baraa Orabi, Ning Xie, Brian McConeghy, Xuesen Dong, Cedric Chauve, Faraz Hach
Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing. Nucleic acids research (2022)
Alice Yue, Cedric Chauve, Maxwell W Libbrecht, Ryan R Brinkman
Automated identification of maximal differential cell populations in flow cytometry data. Cytometry. Part A : the journal of the International Society for Analytical Cytology (2021)
Cedric Chauve, Yann Ponty, Michael Wallner
Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models. Journal of mathematical biology 80 (5) (2020)
Robert M Waterhouse, Sergey Aganezov, Yoann Anselmetti, Jiyoung Lee, Livio Ruzzante, Maarten J M F Reijnders, Romain Feron, Sèverine Bérard, Phillip George, Matthew W Hahn, Paul I Howell, Maryam Kamali, Sergey Koren, Daniel Lawson, Gareth Maslen, Ashley Peery, Adam M Phillippy, Maria V Sharakhova, Eric Tannier, Maria F Unger, Simo V Zhang, Max A Alekseyev, Nora J Besansky, Cedric Chauve, Scott J Emrich, Igor V Sharakhov
Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies. BMC biology 18 (1) (2020)