Christoph Kaleta

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 38

Top Venues

Nature communications

Microbiology spectrum

Cells

mBio

Christian-Albrechts-Universität zu Kiel

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Christian-Albrechts-Universität zu Kiel Oct 01 2014

Germany

Professor of Medical Systems Biology :: Research Group Medical Systems Biology

University of Southern Denmark Aug 01 2014 - Sep 30 2014

Denmark

Associate Professor of Computational Biology :: Department of Biochemistry and Molecular Biology

Friedrich-Schiller-Universität Jena Jul 01 2011 - Jul 31 2014

Germany

Assistant Professor :: Research Group Theoretical Systems Biology

Friedrich-Schiller-Universität Jena Jan 10 2008 - Jun 30 2011

Germany

Researcher :: Department of Bioinformatics

Publications

Maja Olecka, Alena van Bömmel, Lena Best, Madlen Haase, Silke Foerste, Konstantin Riege, Thomas Dost, Stefano Flor, Otto W Witte, Soeren Franzenburg, Marco Groth, Björn von Eyss, Christoph Kaleta, Christiane Frahm, Steve Hoffmann
Nonlinear DNA methylation trajectories in aging male mice. Nature communications 15 (1) (2024)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. Microbiology spectrum 12 (2) (2024)
Johannes Zimmermann, Agnes Piecyk, Michael Sieber, Carola Petersen, Julia Johnke, Lucas Moitinho-Silva, Sven Künzel, Lena Bluhm, Arne Traulsen, Christoph Kaleta, Hinrich Schulenburg
Gut-associated functions are favored during microbiome assembly across a major part of C. elegans life. mBio 15 (5) (2024)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. Microbiology spectrum 12 (2) (2024)
Johannes Zimmermann, Agnes Piecyk, Michael Sieber, Carola Petersen, Julia Johnke, Lucas Moitinho-Silva, Sven Künzel, Lena Bluhm, Arne Traulsen, Christoph Kaleta, Hinrich Schulenburg
Gut-associated functions are favored during microbiome assembly across a major part of C. elegans life. mBio 15 (5) (2024)
Maja Olecka, Alena van Bömmel, Lena Best, Madlen Haase, Silke Foerste, Konstantin Riege, Thomas Dost, Stefano Flor, Otto W Witte, Soeren Franzenburg, Marco Groth, Björn von Eyss, Christoph Kaleta, Christiane Frahm, Steve Hoffmann
Nonlinear DNA methylation trajectories in aging male mice. Nature communications 15 (1) (2024)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. Microbiology spectrum (2024)
Maja Olecka, Alena van Bömmel, Lena Best, Madlen Haase, Silke Foerste, Konstantin Riege, Thomas Dost, Stefano Flor, Otto W Witte, Soeren Franzenburg, Marco Groth, Björn von Eyss, Christoph Kaleta, Christiane Frahm, Steve Hoffmann
Nonlinear DNA methylation trajectories in aging male mice. Nature communications 15 (1) (2024)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. Microbiology spectrum 12 (2) (2024)
Johannes Zimmermann, Agnes Piecyk, Michael Sieber, Carola Petersen, Julia Johnke, Lucas Moitinho-Silva, Sven Künzel, Lena Bluhm, Arne Traulsen, Christoph Kaleta, Hinrich Schulenburg
Gut-associated functions are favored during microbiome assembly across a major part of C. elegans life. mBio (2024)
Johannes Zimmermann, Agnes Piecyk, Michael Sieber, Carola Petersen, Julia Johnke, Lucas Moitinho-Silva, Sven Künzel, Lena Bluhm, Arne Traulsen, Christoph Kaleta, Hinrich Schulenburg
Gut-associated functions are favored during microbiome assembly across a major part of C. elegans life. mBio 15 (5) (2024)
Johanna Forero-Rodríguez, Johannes Zimmermann, Jan Taubenheim, Natalia Arias-Rodríguez, Juan David Caicedo-Narvaez, Lena Best, Cindy V Mendieta, Julieth López-Castiblanco, Laura Alejandra Gómez-Muñoz, Janneth Gonzalez-Santos, Humberto Arboleda, William Fernandez, Christoph Kaleta, Andrés Pinzón
Changes in Bacterial Gut Composition in Parkinson's Disease and Their Metabolic Contribution to Disease Development: A Gut Community Reconstruction Approach. Microorganisms 12 (2) (2024)
Maja Olecka, Alena van Bömmel, Lena Best, Madlen Haase, Silke Foerste, Konstantin Riege, Thomas Dost, Stefano Flor, Otto W Witte, Soeren Franzenburg, Marco Groth, Björn von Eyss, Christoph Kaleta, Christiane Frahm, Steve Hoffmann
Nonlinear DNA methylation trajectories in aging male mice. Nature communications 15 (1) (2024)
Johanna Forero-Rodríguez, Johannes Zimmermann, Jan Taubenheim, Natalia Arias-Rodríguez, Juan David Caicedo-Narvaez, Lena Best, Cindy V Mendieta, Julieth López-Castiblanco, Laura Alejandra Gómez-Muñoz, Janneth Gonzalez-Santos, Humberto Arboleda, William Fernandez, Christoph Kaleta, Andrés Pinzón
Changes in Bacterial Gut Composition in Parkinson's Disease and Their Metabolic Contribution to Disease Development: A Gut Community Reconstruction Approach. Microorganisms 12 (2) (2024)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. Microbiology spectrum (2024)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. bioRxiv : the preprint server for biology (2023)
Georgios Marinos, Inga K Hamerich, Reena Debray, Nancy Obeng, Carola Petersen, Jan Taubenheim, Johannes Zimmermann, Dana Blackburn, Buck S Samuel, Katja Dierking, Andre Franke, Matthias Laudes, Silvio Waschina, Hinrich Schulenburg, Christoph Kaleta
Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. bioRxiv : the preprint server for biology (2023)
Rahul Unni, Nadia Andrea Andreani, Marie Vallier, Silke Sophie Heinzmann, Jan Taubenheim, Martina A Guggeis, Florian Tran, Olga Vogler, Sven Künzel, Jan-Bernd Hövener, Philip C Rosenstiel, Christoph Kaleta, Astrid Dempfle, Daniel Unterweger, John F Baines
Evolution of E. coli in a mouse model of inflammatory bowel disease leads to a disease-specific bacterial genotype and trade-offs with clinical relevance. Gut microbes 15 (2) (2023)
Silvio Schmidt, Madlen Haase, Lena Best, Marco Groth, Julia Lindner, Otto W Witte, Christoph Kaleta, Christiane Frahm
Restoring Age-Related Cognitive Decline through Environmental Enrichment: A Transcriptomic Approach. Cells 11 (23) (2022)
Silvio Schmidt, Madlen Haase, Lena Best, Marco Groth, Julia Lindner, Otto W Witte, Christoph Kaleta, Christiane Frahm
Restoring Age-Related Cognitive Decline through Environmental Enrichment: A Transcriptomic Approach. Cells 11 (23) (2022)
Helena U Zacharias, Christoph Kaleta, François Cossais, Eva Schaeffer, Henry Berndt, Lena Best, Thomas Dost, Svea Glüsing, Mathieu Groussin, Mathilde Poyet, Sebastian Heinzel, Corinna Bang, Leonard Siebert, Tobias Demetrowitsch, Christian Schmidt, Rainer Adeling, Thorsten Bartsch, Anja Bosy-Westphal, Karin Schwarz, Daniela Berg
Microbiome and Metabolome Insights into the Role of the Gastrointestinal-Brain Axis in Parkinson's and Alzheimer's Disease: Unveiling Potential Therapeutic Targets. Metabolites 12 (12) (2022)
Helena U Zacharias, Christoph Kaleta, François Cossais, Eva Schaeffer, Henry Berndt, Lena Best, Thomas Dost, Svea Glüsing, Mathieu Groussin, Mathilde Poyet, Sebastian Heinzel, Corinna Bang, Leonard Siebert, Tobias Demetrowitsch, Christian Schmidt, Rainer Adeling, Thorsten Bartsch, Anja Bosy-Westphal, Karin Schwarz, Daniela Berg
Microbiome and Metabolome Insights into the Role of the Gastrointestinal-Brain Axis in Parkinson's and Alzheimer's Disease: Unveiling Potential Therapeutic Targets. Metabolites 12 (12) (2022)
Silvio Schmidt, Madlen Haase, Lena Best, Marco Groth, Julia Lindner, Otto W Witte, Christoph Kaleta, Christiane Frahm
Restoring Age-Related Cognitive Decline through Environmental Enrichment: A Transcriptomic Approach. Cells 11 (23) (2022)
Marie-Luise Ederer, Madlen Günther, Lena Best, Julia Lindner, Christoph Kaleta, Otto W Witte, Rowena Simon, Christiane Frahm
Voluntary Wheel Running in Old C57BL/6 Mice Reduces Age-Related Inflammation in the Colon but Not in the Brain. Cells 11 (3) (2022)
Helena U Zacharias, Christoph Kaleta, François Cossais, Eva Schaeffer, Henry Berndt, Lena Best, Thomas Dost, Svea Glüsing, Mathieu Groussin, Mathilde Poyet, Sebastian Heinzel, Corinna Bang, Leonard Siebert, Tobias Demetrowitsch, Christian Schmidt, Rainer Adeling, Thorsten Bartsch, Anja Bosy-Westphal, Karin Schwarz, Daniela Berg
Microbiome and Metabolome Insights into the Role of the Gastrointestinal-Brain Axis in Parkinson's and Alzheimer's Disease: Unveiling Potential Therapeutic Targets. Metabolites 12 (12) (2022)
Helena U Zacharias, Christoph Kaleta, François Cossais, Eva Schaeffer, Henry Berndt, Lena Best, Thomas Dost, Svea Glüsing, Mathieu Groussin, Mathilde Poyet, Sebastian Heinzel, Corinna Bang, Leonard Siebert, Tobias Demetrowitsch, Christian Schmidt, Rainer Adeling, Thorsten Bartsch, Anja Bosy-Westphal, Karin Schwarz, Daniela Berg
Microbiome and Metabolome Insights into the Role of the Gastrointestinal-Brain Axis in Parkinson's and Alzheimer's Disease: Unveiling Potential Therapeutic Targets. Metabolites 12 (12) (2022)
Silvio Schmidt, Madlen Haase, Lena Best, Marco Groth, Julia Lindner, Otto W Witte, Christoph Kaleta, Christiane Frahm
Restoring Age-Related Cognitive Decline through Environmental Enrichment: A Transcriptomic Approach. Cells 11 (23) (2022)
Lady Johanna Forero-Rodríguez, Jonathan Josephs-Spaulding, Stefano Flor, Andrés Mauricio Pinzón, Christoph Kaleta
Parkinson's Disease and the Metal-Microbiome-Gut-Brain Axis: A Systems Toxicology Approach. Antioxidants (Basel, Switzerland) 11 (1) (2021)
Anna S Weiss, Anna G Burrichter, Abilash Chakravarthy Durai Raj, Alexandra von Strempel, Chen Meng, Karin Kleigrewe, Philipp C Münch, Luis Rössler, Claudia Huber, Wolfgang Eisenreich, Lara M Jochum, Stephanie Göing, Kirsten Jung, Chiara Lincetto, Johannes Hübner, Georgios Marinos, Johannes Zimmermann, Christoph Kaleta, Alvaro Sánchez, Bärbel Stecher
In vitro interaction network of a synthetic gut bacterial community. The ISME journal (2021)
Jan Ewald, Flora Rivieccio, Lukáš Radosa, Stefan Schuster, Axel A Brakhage, Christoph Kaleta
Dynamic optimization reveals alveolar epithelial cells as key mediators of host defense in invasive aspergillosis. PLoS computational biology 17 (12) (2021)
Georgios Marinos, Christoph Kaleta, Silvio Waschina
Defining the nutritional input for genome-scale metabolic models: A roadmap. PloS one 15 (8) (2020)
Philipp Dirksen, Adrien Assié, Johannes Zimmermann, Fan Zhang, Adina-Malin Tietje, Sarah Arnaud Marsh, Marie-Anne Félix, Michael Shapira, Christoph Kaleta, Hinrich Schulenburg, Buck S Samuel
CeMbio - The Caenorhabditis elegans Microbiome Resource. G3 (Bethesda, Md.) 10 (9) (2020)
Peer Aramillo Irizar, Sascha Schäuble, Daniela Esser, Marco Groth, Christiane Frahm, Steffen Priebe, Mario Baumgart, Nils Hartmann, Shiva Marthandan, Uwe Menzel, Jule Müller, Silvio Schmidt, Volker Ast, Amke Caliebe, Rainer König, Michael Krawczak, Michael Ristow, Stefan Schuster, Alessandro Cellerino, Stephan Diekmann, Christoph Englert, Peter Hemmerich, Jürgen Sühnel, Reinhard Guthke, Otto W Witte, Matthias Platzer, Eytan Ruppin, Christoph Kaleta
Publisher Correction: Transcriptomic alterations during ageing reflect the shift from cancer to degenerative diseases in the elderly. Nature communications 10 (1) (2019)
Johannes Zimmermann, Nancy Obeng, Wentao Yang, Barbara Pees, Carola Petersen, Silvio Waschina, Kohar A Kissoyan, Jack Aidley, Marc P Hoeppner, Boyke Bunk, Cathrin Spröer, Matthias Leippe, Katja Dierking, Christoph Kaleta, Hinrich Schulenburg
The functional repertoire contained within the native microbiota of the model nematode Caenorhabditis elegans. The ISME journal 14 (1) (2019)
Peer Aramillo Irizar, Sascha Schäuble, Daniela Esser, Marco Groth, Christiane Frahm, Steffen Priebe, Mario Baumgart, Nils Hartmann, Shiva Marthandan, Uwe Menzel, Jule Müller, Silvio Schmidt, Volker Ast, Amke Caliebe, Rainer König, Michael Krawczak, Michael Ristow, Stefan Schuster, Alessandro Cellerino, Stephan Diekmann, Christoph Englert, Peter Hemmerich, Jürgen Sühnel, Reinhard Guthke, Otto W Witte, Matthias Platzer, Eytan Ruppin, Christoph Kaleta
Transcriptomic alterations during ageing reflect the shift from cancer to degenerative diseases in the elderly. Nature communications 9 (1) (2018)
Anja Lück, Lukas Klimmasch, Peter Großmann, Sebastian Germerodt, Christoph Kaleta
Computational Investigation of Environment-Noise Interaction in Single-Cell Organisms: The Merit of Expression Stochasticity Depends on the Quality of Environmental Fluctuations. Scientific reports 8 (1) (2018)
Eugen Bauer, Johannes Zimmermann, Federico Baldini, Ines Thiele, Christoph Kaleta
BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities. PLoS computational biology 13 (5) (2017)
Peter Großmann, Anja Lück, Christoph Kaleta
Model-based genome-wide determination of RNA chain elongation rates in Escherichia coli. Scientific reports 7 (1) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Christoph Kaleta