Daan Frenkel (D Frenkel)

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 24

Top Topics

Molecular Dynamics Simulations

High Resolution

Single Molecule

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

The Journal of chemical physics

The journal of physical chemistry. B

This page only lists publications with an associated author ORCID identifier.

Publications

Samo Curk, Johannes Krausser, Georg Meisl, Daan Frenkel, Sara Linse, Thomas C T Michaels, Tuomas P J Knowles, And Ela Šarić
Self-replication of A β 42 aggregates occurs on small and isolated fibril sites. Proceedings of the National Academy of Sciences of the United States of America 121 (7) (2024)
Samo Curk, Johannes Krausser, Georg Meisl, Daan Frenkel, Sara Linse, Thomas C T Michaels, Tuomas P J Knowles, And Ela Šarić
Self-replication of A β 42 aggregates occurs on small and isolated fibril sites. Proceedings of the National Academy of Sciences of the United States of America 121 (7) (2024)
Samo Curk, Johannes Krausser, Georg Meisl, Daan Frenkel, Sara Linse, Thomas C T Michaels, Tuomas P J Knowles, And Ela Šarić
Self-replication of A β 42 aggregates occurs on small and isolated fibril sites. Proceedings of the National Academy of Sciences of the United States of America 121 (7) (2024)
Samo Curk, Johannes Krausser, Georg Meisl, Daan Frenkel, Sara Linse, Thomas C T Michaels, Tuomas P J Knowles, And Ela Šarić
Self-replication of A β 42 aggregates occurs on small and isolated fibril sites. Proceedings of the National Academy of Sciences of the United States of America 121 (7) (2024)
Samo Curk, Johannes Krausser, Georg Meisl, Daan Frenkel, Sara Linse, Thomas C T Michaels, Tuomas P J Knowles, And Ela Šarić
Self-replication of A β 42 aggregates occurs on small and isolated fibril sites. Proceedings of the National Academy of Sciences of the United States of America 121 (7) (2024)
Arunkumar Bupathy, Daan Frenkel, Srikanth Sastry
Temperature protocols to guide selective self-assembly of competing structures. Proceedings of the National Academy of Sciences of the United States of America 119 (8) (2022)
Alexander Cumberworth, Daan Frenkel, Aleks Reinhardt
Simulations of DNA-Origami Self-Assembly Reveal Design-Dependent Nucleation Barriers. Nano letters 22 (17) (2022)
Samuel W Coles, Etienne Mangaud, Daan Frenkel, Benjamin Rotenberg
Reduced variance analysis of molecular dynamics simulations by linear combination of estimators. The Journal of chemical physics 154 (19) (2021)
Tine Curk, Chris A Brackley, James D Farrell, Zhongyang Xing, Darshana Joshi, Susana Direito, Urban Bren, Stefano Angioletti-Uberti, Jure Dobnikar, Erika Eiser, Daan Frenkel, Rosalind J Allen
Computational design of probes to detect bacterial genomes by multivalent binding. Proceedings of the National Academy of Sciences of the United States of America 117 (16) (2020)
Jiachen Wei, Simón Ramírez-Hinestrosa, Jure Dobnikar, Daan Frenkel
Effect of the interaction strength and anisotropy on the diffusio-phoresis of spherical colloids. Soft matter 16 (15) (2020)
Xipeng Wang, Simón Ramírez-Hinestrosa, Daan Frenkel
Using Molecular Simulation to Compute Transport Coefficients of Molecular Gases. The journal of physical chemistry. B 124 (35) (2020)
Jorge R Espinosa, Jerelle A Joseph, Ignacio S Burgos, Adiran Garaizar, Daan Frenkel, Rosana Collepardo-Guevara
Liquid network connectivity regulates the stability and composition of biomolecular condensates with many components. Proceedings of the National Academy of Sciences of the United States of America 117 (24) (2020)
Alexander Cumberworth, Aleks Reinhardt, Daan Frenkel
Lattice models and Monte Carlo methods for simulating DNA origami self-assembly. The Journal of chemical physics 149 (23) (2019)
Karel Proesmans, Daan Frenkel
Comparing theory and simulation for thermo-osmosis. The Journal of chemical physics 151 (12) (2019)
Lunna Li, Tim Totton, Daan Frenkel
Computational methodology for solubility prediction: Application to sparingly soluble organic/inorganic materials. The Journal of chemical physics 149 (5) (2018)
K F Kelton, Daan Frenkel
Preface: Special Topic on Nucleation: New Concepts and Discoveries. The Journal of chemical physics 145 (21) (2018)
Lunna Li, Tim Totton, Daan Frenkel
Computational methodology for solubility prediction: Application to the sparingly soluble solutes. The Journal of chemical physics 146 (21) (2018)
And Ela Šarić, Thomas C T Michaels, Alessio Zaccone, Tuomas P J Knowles, Daan Frenkel
Kinetics of spontaneous filament nucleation via oligomers: Insights from theory and simulation. The Journal of chemical physics 145 (21) (2018)
Jorge R Espinosa, Charlie R Wand, Carlos Vega, Eduardo Sanz, Daan Frenkel
Calculation of the water-octanol partition coefficient of cholesterol for SPC, TIP3P, and TIP4P water. The Journal of chemical physics 149 (22) (2018)
Charlie R Wand, T S Totton, Daan Frenkel
Addressing hysteresis and slow equilibration issues in cavity-based calculation of chemical potentials. The Journal of chemical physics 149 (1) (2018)
Peter Wirnsberger, Domagoj Fijan, Roger A Lightwood, Anđela Šarić, Christoph Dellago, Daan Frenkel
Numerical evidence for thermally induced monopoles. Proceedings of the National Academy of Sciences of the United States of America 114 (19) (2017)
Daan Frenkel, K Julian Schrenk, Stefano Martiniani
Monte Carlo sampling for stochastic weight functions. Proceedings of the National Academy of Sciences of the United States of America 114 (27) (2017)
Tine Curk, Jure Dobnikar, Daan Frenkel
Optimal multivalent targeting of membranes with many distinct receptors. Proceedings of the National Academy of Sciences of the United States of America 114 (28) (2017)
Katerina Ioannidou, Matej Kanduč, Lunna Li, Daan Frenkel, Jure Dobnikar, Emanuela Del Gado
The crucial effect of early-stage gelation on the mechanical properties of cement hydrates. Nature communications 7 (2016)